Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1272 ATGAAGATCAGAGATGGCTCTCAAAACGAAGCAGTGTTAATAATGGGGCTTGCCATTGTCAGCCTCGTTTCAGTGGCATCTGCTATTCCTGGAACTACCACTTTTTACACTGAATACGTTCCATCGGCATGCTATGGATTTCAAGATCAAGGAACGATGATTGCAGCAGCAGGTGACGCAATCTGGAACAATGGAGCTGCATGTGGAAAAATGTACACAGTGACTTGCACCAGTGGCACCAACAATGCTGTTCCTCAGCCGTGTAAAGGAGGAAGCGCCACCGTCAAGATCGTTGACCGCTGTCCTTCTCCGGGATGCCAAGCAACCTTGGATCTCTCTCAGGAAGCTTTTTCTATCATTGCTAACCCGGACGCAGGAAAAGTTAATATAGAATATGATGTAGATAATAATGGCACCATCTATAAATCATCAGATAATAATCTTATTTGTGTTTCAAATTCCATGTAA 468 0.438 MKIRDGSQNEAVLIMGLAIVSLVSVASAIPGTTTFYTEYVPSACYGFQDQGTMIAAAGDAIWNNGAACGKMYTVTCTSGTNNAVPQPCKGGSATVKIVDRCPSPGCQATLDLSQEAFSIIANPDAGKVNIEYDVDNNGTIYKSSDNNLICVSNSM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1272 155 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 31 132 IPR007112 -
Alju06g1272 155 SMART dpbb_1 54 132 IPR007112 -
Alju06g1272 155 SUPERFAMILY Barwin-like endoglucanases 18 134 IPR036908 -
Alju06g1272 155 CDD DPBB_EG45-like 29 132 - -
Alju06g1272 155 Pfam Lytic transglycolase 56 132 IPR009009 -
Alju06g1272 155 Gene3D - 28 134 IPR036908 -
Alju06g1272 155 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 9 133 IPR044206 GO:0009627|GO:0048046
Alju06g1272 155 FunFam Barwin-related endoglucanase 28 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1272 Alju-ChrAlju06 13299438 13300355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1272 53 133 Expansin Gene Family AT2G45110 32.609 4.98e-07 45.8