Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1265 ATGCTTTCGAAATCTTGCTTAGACCTTTTAAGTCTGGTCTCCGTTGATGATTACCGAGCACTGTGTCAGATCCCGAGAGTCACAACGGTGCCGGGAGTTGTATCGAAATTCGACGCCACAGCAGACGACAACCATGCCGATTCTGGCTCCGGATCCGACGACTCCCTTTCGCCTGGGACTCCCGAGCGAAGGGTCATAGTCGCGAACCAGTTGCCGATACGGGCGTTTCGGGACGAGTTCACCAAGAAATGGAGTTTTGAATTCGACAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGGTTTCCCTCCGACGTCGACGTTCTGTACGTCGGGTCGTTGAAGGAGGAGATCGACCCGTCGGAACAAGACGAAGTGGCGCAAGTTTTGCTGGAAAAGTTTCGGTGCGTACCAACCTTCTTGCCCTCTGAAATTCACTATAAGTACTACCATGGCTTCTGCAAGCATTACCTTTGGCCTCTGTTTCATTACATGGTACCTATGTCGACGAGCCAAGGTGCTCACTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTTGCGAACAAGGTAACAGAGGTGATCAACCCTGACGAGGATTATGTTTGGGTCCATGATTACCATCTAATGATCTTGCCTACAATACTGAGGAGACGGTTCCACCGGGTTAAGCTGGGATTCTTTATGCATAACACATTTCCGTCTTCGGAAATTTATAGAACTTTACCCATTCGCGATGATCTCCTTCGGTCCTTGTTGAATTGTGATTTGATCGGATTTCACACATTTGATTATGCGAGGCATTTCTTGTCCTGTTGCAGCAGGATATTCGGTCTGGATTATGAGTCTAAGAGGGGTTACATAGGACTGGATTATTACGGTCGAACCGTGATGATTAAGATCCTGCCGGCTGGAATCCACATGGGTCAACTTGAATTGGTGTTTTCGCAGTCGGAGACGGCTGAGAAGATTAAGGAACTGAAGAAACTATATGAGGGGAAATTTGTGATTTTGGGTATGGATGACATGGATTTGTTCAAAGGTATCAACTTGAAGTTCTTAGCAATGGGGCAACTCTTGGATATGCACGAAGAATTAAGGGGTCGAGTGGTTTTAGTTCAGATTCTGAACCCTGCAAGGAGCGAAGGTAAAGACATTCAAGATGTTCAAAACGAGACTAATGCGATCGCCAAGGAAGTCAATGAGAAATACGGCGAACCGGGTTACCAGCCAATTACCATAATCAACGGCCCAGTTTCAACACTACAGAAGGCTGCTTATTGTGCCATTTCTGACTGCTGTGTTGTAAATGCTGTGAGAGATGGCATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGCTGTGTGTTGGACAAAGCACTTGAGGAAGAAGGAGAAGATGACAATGACTCAAAAAGGCCTAAGCAGAGTGTCATCATAGTCTCTGAGTTCATTGGATGCTCGCCATCTCTGAGTGGTGCTATCCGAGTGAACCCATGGAACATCGAAGAGGTCTCTGACGCCATGAATGTAGCAGCAACAATGCCAGAGGCAGAGAAGCATTTGCGGCACGAGAAGCATTACAAGTACATAAGCTCTCACGATGTCACTTATTGGGCTCGGAGTTTCGATCAGGACTTGGAGAGAGCATGCAGGGATCATTACCTCAAGAGGTATTGGGGTGTTGGCCTAGGCTTGGGGTTCAGAATTGTGGCTTTGGATCCTACATTTAGGAAGCTTTCAGTGGATAACATTGTATCTGCTTATAGAAATACACAATGCCGTTTGATCCTTCTGGATTATGATGGTACTATGTTACCACAGTCATCTGTGGACAAAACTCCGACCAACGAGGTTATCTCAATCTTGAATTCTCTGTGTAGTGATCCCAAGAACATTGTGTTCATTGTGAGTGGAAGAGATAAGAAGTGCCTGAGCAAGTGGTTTTCTCCATGTGAGAAGCTTGGTCTCTCAGCCGAGCATGGTTACTTCACCAGGTGGAATACTGATTCTTCATGGGAGAGTTGTGGATTGACAATGGACTTTGATTGGAAAAAGGTTGCAGAACCCGTAATGGCGCTTTACACAGAAGCAACCGATGGCTCTTTCATTGAACATAAGGAAAGCGCACTGGTTTGGCATCACCAAGAAGCTGACCCTCACTTTGGATCATCCCAAGCCAAAGAGCTTCTCGATCACCTCGAGAGCGTTCTTGCCAATGAGCCAGTCATCGTCAAAAGAGGACAACACATTGTTGAAGTCAACCCTCAGGGTGTGAGCAAAGGCATAGCAGTGGAAAGCCTGATATCGAGCGTGAGGAAAGCGGGGAAGTCTCTGGATTTTCTGCTGTGTGTAGGAGATGATCGCTCAGATGAAGACATGTTTGAGAGTATTGGTTGCACAGTCTCTAATTCAAACCTACCAGCTATAGGACAAGTGTTTGCATGCACAGTTGGTCAGAAACCAAGCATGGCCGAGTATTATTTGGATGATACTTGTGAAGTCATCAGGTTGCTCAAAGGACTTGCTAATGCTTCTTCTGTTTCAGCAGTGTCACCACCTTCAATGTCTCTATATTCTCTGGAGGATGATTCACTAGGATCTCTATAG 2628 0.4635 MLSKSCLDLLSLVSVDDYRALCQIPRVTTVPGVVSKFDATADDNHADSGSGSDDSLSPGTPERRVIVANQLPIRAFRDEFTKKWSFEFDSDSLVLQLKDGFPSDVDVLYVGSLKEEIDPSEQDEVAQVLLEKFRCVPTFLPSEIHYKYYHGFCKHYLWPLFHYMVPMSTSQGAHFDRSQWQAYVLANRIFANKVTEVINPDEDYVWVHDYHLMILPTILRRRFHRVKLGFFMHNTFPSSEIYRTLPIRDDLLRSLLNCDLIGFHTFDYARHFLSCCSRIFGLDYESKRGYIGLDYYGRTVMIKILPAGIHMGQLELVFSQSETAEKIKELKKLYEGKFVILGMDDMDLFKGINLKFLAMGQLLDMHEELRGRVVLVQILNPARSEGKDIQDVQNETNAIAKEVNEKYGEPGYQPITIINGPVSTLQKAAYCAISDCCVVNAVRDGMNLVPYMYTVCRQGSCVLDKALEEEGEDDNDSKRPKQSVIIVSEFIGCSPSLSGAIRVNPWNIEEVSDAMNVAATMPEAEKHLRHEKHYKYISSHDVTYWARSFDQDLERACRDHYLKRYWGVGLGLGFRIVALDPTFRKLSVDNIVSAYRNTQCRLILLDYDGTMLPQSSVDKTPTNEVISILNSLCSDPKNIVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWNTDSSWESCGLTMDFDWKKVAEPVMALYTEATDGSFIEHKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQGVSKGIAVESLISSVRKAGKSLDFLLCVGDDRSDEDMFESIGCTVSNSNLPAIGQVFACTVGQKPSMAEYYLDDTCEVIRLLKGLANASSVSAVSPPSMSLYSLEDDSLGSL 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1265 875 Gene3D Glycogen Phosphorylase B; 317 538 - -
Alju06g1265 875 FunFam Alpha,alpha-trehalose-phosphate synthase 317 538 - -
Alju06g1265 875 SUPERFAMILY HAD-like 601 849 IPR036412 -
Alju06g1265 875 MobiDBLite consensus disorder prediction 41 60 - -
Alju06g1265 875 Pfam Trehalose-phosphatase 604 837 IPR003337 GO:0003824|GO:0005992
Alju06g1265 875 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 558 - -
Alju06g1265 875 CDD GT20_TPS 63 554 IPR001830 GO:0003824|GO:0005992
Alju06g1265 875 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 600 717 - -
Alju06g1265 875 CDD HAD_TPP 602 843 - -
Alju06g1265 875 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 730 860 - -
Alju06g1265 875 Gene3D Glycogen Phosphorylase B; 59 316 - -
Alju06g1265 875 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 850 IPR001830 GO:0003824|GO:0005992
Alju06g1265 875 NCBIfam trehalose-phosphatase 601 848 IPR003337 GO:0003824|GO:0005992
Alju06g1265 875 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 57 315 - -
Alju06g1265 875 NCBIfam HAD-IIB family hydrolase 602 808 IPR006379 -
Alju06g1265 875 Pfam Glycosyltransferase family 20 63 554 IPR001830 GO:0003824|GO:0005992
Alju06g1265 875 Gene3D - 600 717 IPR023214 -
Alju06g1265 875 Gene3D - 729 857 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1265 Alju-ChrAlju06 13195738 13198546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1265 1 855 Trehalose Biosynthesis Gene Families AT2G18700 65.273 0.0 1170