Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1263 ATGAAGTTTAATTTTCGTCCTCGTTTCTCACATCGCTACCACCGAAACCAAACTTATCATCGACAAAACACGGACTCTTCCGACTTGGAAGCAAGATGGTCGGGTTTCACTGTAACCTTAGTTCTTGCTGCTGTTTCCGTTACTGCTGCTGTGTCCGTGTACTTGTTCAAGACGAAAATCAAAGCTCTGAACTCCAACCTTCGTGAGCTTGAGGCATCACTCAAGTCATCCTTAGAGAAATGCGCCTCTGAGAGGCAAGGCCGCATTAGGGCACAACAGTCCTTGAGAAAAGCACTAACACAACCTCAAAGTGAAAACGTAGAGATGAATTACTATCCCATGGCACCTATTGGCATCATCCAATCATGCTTCTCTACAAGAAATGGAACACCAAGGCAACCATTGCTTGTACCTCTTGCTAGAGCATCTTTGATTTTCAATACAACTCGTGTACCACCAGCATCACTTGAGGGTCTTGCAGAATATTCTCATTGCTGGGTTATATATGTATTTCATCTAAATACAGATCTTGAGAAGCTATGGAATCATCCATCTAAGTCAAAGTTCAAGGCGAAGGTGAGGGTTCCAAGATTGCAAGGTGGAAGAAAGGGACTGTTCGCCACACGATCCCCACATCGTCCGTGTCCCATTGGACTGACAATTGCAAAGGTGGAAGCTGTAGAGGGAAATATGGTTTTACTTTCTGGTGTGGACCTGGTTGATGGAACTCCAGTGCTCGATGTCAAGCCCTATCTACCATACTGTGACAGCGTTGCAGAAGCAAACGTGCCTAATTGGTTGATGGAGGATAACTTACTTGCAGTAGCTTCTATAAGCTTCTCAGAGGACTTTACTTCAACCCTGGAAAATTGCTGGAGAATGGTAGGAAAGAAATCACTTTATGCATCGGCAGGCGAATTCCAAAGTTTGATAAAGCAGGTTCTTTCATGGGATATTCGATCAGTTAGTCAGCGGAAGAGACCTCACGATGCCATCTCAAAGAAAGACGATGATGAACAGATGGGTGACCTTTCTGATAGAGATGAGAGCCTAGATGAAGCAGCTTGTGTTCTTGAAAGAGAGCAGAATTCTCTATATTCCAAGGAAGTAATTTATCACCTTATTTTGGAGGGACTGGATGTCTCCTATAGAATTGATGACAATAATAATGTCATTGTCGAAAAGGTGTCACCTTTTACTGGCCTAAGCAATGATCGTAATTTTGTAGCTAGCTTCCCAACATCGCCAAGAGTTTCACAAGGGAATGATTTATTGACCCATGAACTGCGTATCTCCATTTCTAATATTGCCAATATGAAGGAGCTTTCCTCCTTTGTGATACGGGCCGAGATAAAGAAAGTTCAGAAAAACTTTGGTTGGTGTTATGAGGGATGCAGCAACTACAGCTGTGGTGCAAAATTGAAGAGTAGGGTTCTAAACTGTCATGGGTGTCAAGGACCAGTGTCAGAGATTGTGCTCAAATATAAATTACACTTGATTGTGGCTGATGATACTGGAACTACATCGGTTGTCCTTTTTGATGGTGTTGCCTCAAGGCTATTGAACAAAAGTGCTAAGCTCTTAAAGGACCAATTGATTGCGGAAGGACGCCGAGATACTTTTCCCGAGGAATTTGAGGATTTGGTCGGTCGGACATTTGTAATGAAATTGAGATTGAGTGAATACAATTCCAAGCACAGATCATCAAGCATCAGTGTCCGGTATCTATCTGATGATGCAGACATCATTAGAGAATTCACTCTTTCTGATCCTCAGGATAATATTTCTTGA 1791 0.4266 MKFNFRPRFSHRYHRNQTYHRQNTDSSDLEARWSGFTVTLVLAAVSVTAAVSVYLFKTKIKALNSNLRELEASLKSSLEKCASERQGRIRAQQSLRKALTQPQSENVEMNYYPMAPIGIIQSCFSTRNGTPRQPLLVPLARASLIFNTTRVPPASLEGLAEYSHCWVIYVFHLNTDLEKLWNHPSKSKFKAKVRVPRLQGGRKGLFATRSPHRPCPIGLTIAKVEAVEGNMVLLSGVDLVDGTPVLDVKPYLPYCDSVAEANVPNWLMEDNLLAVASISFSEDFTSTLENCWRMVGKKSLYASAGEFQSLIKQVLSWDIRSVSQRKRPHDAISKKDDDEQMGDLSDRDESLDEAACVLEREQNSLYSKEVIYHLILEGLDVSYRIDDNNNVIVEKVSPFTGLSNDRNFVASFPTSPRVSQGNDLLTHELRISISNIANMKELSSFVIRAEIKKVQKNFGWCYEGCSNYSCGAKLKSRVLNCHGCQGPVSEIVLKYKLHLIVADDTGTTSVVLFDGVASRLLNKSAKLLKDQLIAEGRRDTFPEEFEDLVGRTFVMKLRLSEYNSKHRSSSISVRYLSDDADIIREFTLSDPQDNIS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1263 596 SUPERFAMILY Nucleic acid-binding proteins 431 564 IPR012340 -
Alju06g1263 596 Gene3D - 419 582 IPR012340 -
Alju06g1263 596 SUPERFAMILY YaeB-like 109 331 IPR036413 -
Alju06g1263 596 ProSiteProfiles TsaA-like domain profile. 114 260 IPR023370 -
Alju06g1263 596 Pfam tRNA-methyltransferase O 129 256 IPR023370 -
Alju06g1263 596 Gene3D - 113 270 IPR036414 -
Alju06g1263 596 CDD RPA1_DBD_C 445 567 IPR047192 -
Alju06g1263 596 PANTHER UNCHARACTERIZED 48 398 IPR040372 -
Alju06g1263 596 Coils Coil 60 80 - -
Alju06g1263 596 Pfam Replication factor-A C terminal domain 445 567 IPR013955 -
Alju06g1263 596 CDD UPF0066 116 251 IPR023370 -
Alju06g1263 596 FunFam tRNA (Adenine(37)-N6)-methyltransferase isoform A 113 269 - -
Alju06g1263 596 NCBIfam tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO 110 261 IPR023370 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1263 445 577 Core DNA Replication Machinery Family AT5G08020 26.812 6.78e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1263 06 13147354 13154693 Alju06g1263 06 13147354 13154693 ECH