Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1243 ATGGGGTTTGCAGGCAGTATTGGAAAATACAAACTTGGTCGGACGATTGGCGAAGGGACATTCGCTAAGGTTAAGCTTGCTGTTAACAGCATCAATGGTCAACATGTGGCAATCAAGATCCTTGATAAGAATATGGTCATGGAGAGCCATCTCAAGTATCAGGTCAAACGAGAGATAAGAACAATGAAGCTCCTGAATCATCCCAACATTGTAAAAATCCATGAGGTTCTTGGCACGAAGACGAAGATATATATTGTGATGGAGTATGTATCAGGAGGACAATTATCAGACAAACTGTCTTATGCCATAAAGTTGAATGAAAATGAAGCAAGGAAACTCTTCCAGCAACTTATTGATGCTGTAGATTACTGCCATAACAAAGGAGTTTACCATAGAGATCTTAAGCCAGCAAACTTGCTTCTCGACAGCAAAGGGAATCTGAAGCTGTCTGATTTCGGACTAAGCGCACTGAGAAAGCCTGATAATGTTCTAACAACTGCATGTGGTTCCCCAAGCTATGTGGCACCTGAGCTTCTATGGAGCAAGGGCTACGATGGAGCAGCTGCTGATGTTTGGTCTTGTGGGGTGATCCTTTTTGAATTACTTGCAGGCCATCTTCCTTTTGATGACCACAACTTGATGAACTTGTATAAGAAGATATGTAGAGCAGAGTACAAGTGTCCACCATGGTTTACAGCAAGTCAAAGGAAACTAATTGCCAAAATACTCGAACCACGAGTTACAAAGAGAATGACTATGCCAGATATTATGGAAGATGAATGGTTTCAAACAGATTATGTTCCTGCTTGTGAATCTGAGTGTGATCAGAACATTCACATGGATGATGTTAATGCTGCTTTTGATTCAGTTGAGGAGAATATCTTAGAGGCAACAATCCCCAAGTCCTCAAGTTTCATTAATGCTTTCCAACTTATAGCCATGTCTCAAGACCTTGATCTATCAGGTCTTTTTGAAGAACAGGATCACAAGCAGAAAACAAGAATAGGATCCAAGCACAACATTGATGAAACCATAGAGAAAATAGAAACTGCAGCTACAGATGTGAAGCTGTCAATAGAAAAAAAGAACAACTTCACGTTAAAAATGCAACCCAAAGGAACCATGACTAGATGTTCCAGATCATATTATGACCTATCAGCTAAGGTGATTGAAGTTGCTCCAGCTCATTGTGTTGTTGAAATATCAAAATCTGCAGGAGATTTAATAATCTACAATGAATTTTGTCAAAGTCTGTCCAATCTACTGACAGAAAAATCTGTTGAATTATCGCAATCCCATGAGTCTAACGAAGAATGCATCACAGAAACGAATAACCAAGATGCTGGCCGCTCTGAAGAGTCGAACCAGGAAGATAATAAAGGCATTCATGAACATATATCTACTTGA 1407 0.3973 MGFAGSIGKYKLGRTIGEGTFAKVKLAVNSINGQHVAIKILDKNMVMESHLKYQVKREIRTMKLLNHPNIVKIHEVLGTKTKIYIVMEYVSGGQLSDKLSYAIKLNENEARKLFQQLIDAVDYCHNKGVYHRDLKPANLLLDSKGNLKLSDFGLSALRKPDNVLTTACGSPSYVAPELLWSKGYDGAAADVWSCGVILFELLAGHLPFDDHNLMNLYKKICRAEYKCPPWFTASQRKLIAKILEPRVTKRMTMPDIMEDEWFQTDYVPACESECDQNIHMDDVNAAFDSVEENILEATIPKSSSFINAFQLIAMSQDLDLSGLFEEQDHKQKTRIGSKHNIDETIEKIETAATDVKLSIEKKNNFTLKMQPKGTMTRCSRSYYDLSAKVIEVAPAHCVVEISKSAGDLIIYNEFCQSLSNLLTEKSVELSQSHESNEECITETNNQDAGRSEESNQEDNKGIHEHIST 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1243 468 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1243 468 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1243 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Alju06g1243 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 408 - -
Alju06g1243 468 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Alju06g1243 468 CDD CIPK_C 307 419 - -
Alju06g1243 468 MobiDBLite consensus disorder prediction 431 450 - -
Alju06g1243 468 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Alju06g1243 468 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Alju06g1243 468 FunFam Non-specific serine/threonine protein kinase 4 302 - -
Alju06g1243 468 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1243 468 Pfam NAF domain 304 361 IPR004041 GO:0007165
Alju06g1243 468 SUPERFAMILY Protein kinase-like (PK-like) 7 310 IPR011009 -
Alju06g1243 468 MobiDBLite consensus disorder prediction 431 468 - -
Alju06g1243 468 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Alju06g1243 468 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Alju06g1243 468 Gene3D Transferase(Phosphotransferase) domain 1 95 289 - -
Alju06g1243 468 Gene3D Kinase associated domain 1, KA1 301 425 - -
Alju06g1243 468 MobiDBLite consensus disorder prediction 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1243 Alju-ChrAlju06 12807628 12810667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1243 7 418 CBL-interacting serine-threonine protein kinases AT1G01140 49.400 7.32e-148 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju06g1243 Pkinase 3.7e-72 CL0016