Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1229 ATGGGAATTGAAACAGAAATTCCATGTGATGATGAATTCATTTTCCGTTCCAAACTACCTGACATTTTCATCCCAAGTCACCTCCCATTATTCTCGTACTGTTTCCAGAATTCCTCCCAATTCAAACACCGTCCATGTTTGATCAACAGCAAAACCAACCAGACATTCACCTACGCTGACGTGGAACTCATTTCCACAAAACTCGCCTCCGGCCTCAACAACCTCGGCTTCCAACAAGGCCACGTCATCATGCTCCTCCTCCCCAACTCCCCCGAATTCGTCTTCTCCTTCCTCGGAGCCGCCCGCCTCGGCGTCATCGTCACCACCGCCAACCCATTCTACACCGCTGCCGAGGTCGCAAAGCAAGCCACTGCTTCAAACACCAAGCTCATCATCACGCAAACATCCTTCGCCGACAAAGTTAACGATTTCGCCAGAGACAACAACGTTAAACTGGTGCTCATCGACGACAACCATAACACAGCCCTGTCGGAGGAGAAGGATATTATTATGTCCAATTTCGTACGTTTCTCCGATTTGGTGAAGGAGGAGGCAGAGAACAATAACGTCCCGCCGGTGACGATCTCACCGGACGACATCGCCGCCATGCCTTACTCATCAGGCACCACGGGGCTTCCAAAGGGAGTGATGCTAACACATAAAGGTCTGGTCACAAATGTTGCACAACTAGTTGACGGAGAGAATCCAAATCTTTATATTCACAGTGAGGATGTGATTGCGTGTATTTGTCCTCTGTTTCATAGTTATTCGCTGTTTACGATTTTGCTGTGTGGGCTTCGTGTGGGAGCTGCGATTCTGATCATACCTAAGTTTGAGATAGTGACTATGTTGGAGTTGGTTCAGAAACACAGAGTGACCGTTGCGCCGTTTGTGCCACCTATTCTGTGGGCCATTGTTAATGCGCAAAACCTGCAACAATACGACGTGTCGTCTATTAGGATGATCATGAGTGCTGCAGCCCCCTTGAGGAAGGAGCTTGAAGATGCTGTGAAGGAGAAGCTTCCTAATGCCACTCTGGCACAGATGTACGGGATGACGGAGGCTGGTCCAGCTGTGTCCTCGAGCTTAGCGTTTGCGAAAGAGGCGTACAAGGTGAAATCAGGTGCGTGCGGGACCATAGTAAGAAACGCTGAGATGAAGATCGCTGATCCGGACACCGGTATATCCCTTGGCCGGAATCAAGTCGGAGAGATTTGTATCAGAGGCAAGCAGATTATGAAAGGTTACATAAACGACCCAGAAGCAACAAAGAGAACTATAGACGAAAGAGGATGGCTCCACACTGGTGATATTGGATATGTGGACGACGACGAAGAGCTGTTCATAGTGGATCGCCTTAAGGAAATCATCAAATATAAAGGCTTTCAAGTGCCTCCTGCTGAGCTTGAAGCTCTTCTTCTTTCTCATCCTTCCATTTCAGATGCTGCTCTTGTTCCGATGAAAGATGAAGTTGCAGGAGAGCTTCCTGTCGCATTCGTCGTTGTGTATTACAAGAGAATCAAGGTGGTCTTTTTTGTGGGCTCTATTCCAAGGACAGCCTCCGGCAAGATTCTGCGCAGAGAGCTCAAAGCAAGGCTCCCAAACGAGTGA 1611 0.486 MGIETEIPCDDEFIFRSKLPDIFIPSHLPLFSYCFQNSSQFKHRPCLINSKTNQTFTYADVELISTKLASGLNNLGFQQGHVIMLLLPNSPEFVFSFLGAARLGVIVTTANPFYTAAEVAKQATASNTKLIITQTSFADKVNDFARDNNVKLVLIDDNHNTALSEEKDIIMSNFVRFSDLVKEEAENNNVPPVTISPDDIAAMPYSSGTTGLPKGVMLTHKGLVTNVAQLVDGENPNLYIHSEDVIACICPLFHSYSLFTILLCGLRVGAAILIIPKFEIVTMLELVQKHRVTVAPFVPPILWAIVNAQNLQQYDVSSIRMIMSAAAPLRKELEDAVKEKLPNATLAQMYGMTEAGPAVSSSLAFAKEAYKVKSGACGTIVRNAEMKIADPDTGISLGRNQVGEICIRGKQIMKGYINDPEATKRTIDERGWLHTGDIGYVDDDEELFIVDRLKEIIKYKGFQVPPAELEALLLSHPSISDAALVPMKDEVAGELPVAFVVVYYKRIKVVFFVGSIPRTASGKILRRELKARLPNE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1229 536 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 531 - -
Alju06g1229 536 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Alju06g1229 536 FunFam Long-chain-fatty-acid--CoA ligase FadD 16 454 - -
Alju06g1229 536 SUPERFAMILY Acetyl-CoA synthetase-like 20 535 - -
Alju06g1229 536 Pfam AMP-binding enzyme 36 459 IPR000873 -
Alju06g1229 536 Pfam AMP-binding enzyme C-terminal domain 468 502 IPR025110 -
Alju06g1229 536 CDD 4CL 24 529 - -
Alju06g1229 536 Gene3D - 455 536 IPR045851 -
Alju06g1229 536 Gene3D - 12 454 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1229 Alju-ChrAlju06 12559495 12563576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1229 10 501 Monolignol Biosynthesis Gene Families AT1G51680 63.489 0.0 627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1229 06 12559495 12563576 Alju06g1229 06 12559495 12563576 ECH