Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1228 ATGGAAACTCAACATCATGATGATGAATTCATTTTTCGTTCCAAGTTGCCGGACATTTACATTCCATCCCACCTTCCATGGCACAGTTACTGCTTCCAGAACTTGTCCCAATTCAAACACCGTCCCTGCCTTATCGACGGCGGCACCGGCGAGACTTTCACGTACGCCGACGTCGAACTCATCTCCCTGAGAGTCGCTGCCGGCCTCAACAACCTCGGCATCCAACAAGGCCACGTCATCATGCTCCTCCTTCAGAACTGTCCCCAGTTCGTCTTCGCCTTCCTCGGCGCCTCCTACCGCGGCGCCATTGTCACGACGGCCAACCCGTTCTACACCCAGGCGGAGGTCGCCAAGCAAGCAAAAGCTTCCAAAGCCAAGCTCATCATAACACAATCCTCCTTCGTCGACAAGGTTAAGGATTTAGAGACAAACAATGGCATCAAAGTGATGTGTATCGACGAGACGACTGATTTTCTCGGTTTCTCAGATTTAACGAAGGCCGACGAAGGGGGGATCCCGCCGGTGGAGATATCCCCAGACGACGTTGTTGCGCTGCCATATTCATCAGGCACCACAGGGCTTTCCAAAGGGGTTATGCTCACACACAAGAGCCTAGTGACTAGTGTGGCCCAACAAGTCGATGGAGAGAACCCTAATCTGTATTTTCACAACGATGATGTGATTGTGTGCGTTTTGCCTCTGTTTCACATTTATGGGTTGAACTCTGTGTTGTTGTGTGGTCTTCGAGTTGGTGCTGCGATTTTGATCGTACAGAAGTTTGAGATCGGAAATTTGCTTGAGCTGATACAGAAACACCGAGTGAGTATTGCGCCGTTTGTACCACCCATAGTGTTGGCCATTGCGAAGAGCCCAAACCTGGATCGATACGACCTGTCGTCTATAAGAATGATCTTGTCTGGTGCGGCTCCTCTGGGAAAAGAGCTCGAAGATGCTGTGAAGGCTAAGCTTCCACAAGCCACACTCGGACAGGGATATGGAATGACGGAGGCAGGGCCAGTTCTGTCAATGAGCTTAGCATTTGCCAAAGAGGCGCTTGGGGTAAAATCAGGTGCCTGTGGGACCGTCGTAAGAAATGCCGAGATGAAGATCGTTGACCCTATCTCCGGCGCCTCCCTTCGCCGTAATCAAGCTGGTGAGATTTGCATTAGAGGACACCAGATCATGAAAGGTTACATAAACGACATAGAGGCAACGAAAAGAACAATAGACGAGAGAGGGTGCCTACACACAGGTGATATTGGATACATAGACGACGACGATGAACTCTTCATTGTGGATCGCCTCAAGGAACTCATCAAATACAAAGGCTTTCAAGTTGCTCCTGCTGAACTTGAGGCTCTCCTCATTTCTCATCCTTCCATTTCTGATGCCGCTGTTGTTCCGATGAAAGATGAAGGTGCAGGAGAAGTTCCCGTGGCTTTTGTTGTAACATCAAACGGTTCTAATGTCTCTGAAGATGAAATCAAGCACTACATCTCCAATCAGGTTGTATTTTACAAGAGAATCAAAAGGGTTATTTTCGTAAACTCAATTCCAAAGGCACCCTCCGGCAAGATACTGCGGAAAGACCTACAAGCAAGGCTCATACCAAATTAG 1617 0.4892 METQHHDDEFIFRSKLPDIYIPSHLPWHSYCFQNLSQFKHRPCLIDGGTGETFTYADVELISLRVAAGLNNLGIQQGHVIMLLLQNCPQFVFAFLGASYRGAIVTTANPFYTQAEVAKQAKASKAKLIITQSSFVDKVKDLETNNGIKVMCIDETTDFLGFSDLTKADEGGIPPVEISPDDVVALPYSSGTTGLSKGVMLTHKSLVTSVAQQVDGENPNLYFHNDDVIVCVLPLFHIYGLNSVLLCGLRVGAAILIVQKFEIGNLLELIQKHRVSIAPFVPPIVLAIAKSPNLDRYDLSSIRMILSGAAPLGKELEDAVKAKLPQATLGQGYGMTEAGPVLSMSLAFAKEALGVKSGACGTVVRNAEMKIVDPISGASLRRNQAGEICIRGHQIMKGYINDIEATKRTIDERGCLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSISDAAVVPMKDEGAGEVPVAFVVTSNGSNVSEDEIKHYISNQVVFYKRIKRVIFVNSIPKAPSGKILRKDLQARLIPN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1228 538 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Alju06g1228 538 Gene3D - 2 435 IPR042099 -
Alju06g1228 538 Pfam AMP-binding enzyme 34 441 IPR000873 -
Alju06g1228 538 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Alju06g1228 538 CDD 4CL 21 531 - -
Alju06g1228 538 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 533 - -
Alju06g1228 538 SUPERFAMILY Acetyl-CoA synthetase-like 13 535 - -
Alju06g1228 538 FunFam 4-coumarate--CoA ligase 2 437 537 - -
Alju06g1228 538 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 436 - -
Alju06g1228 538 Gene3D - 436 536 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1228 Alju-ChrAlju06 12537937 12546191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1228 2 503 Monolignol Biosynthesis Gene Families AT1G51680 68.689 0.0 700