Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1226 ATGAGAGACTTCTGGACCTCTTTGGCGTCGATTCTGGGCGTTTTTGCTTTCTGTCAGACTCTTCTACAGACGGTTTTCCCTCCGGAGCTCCGGTTCGCCACCGTCAAGTTCTTTAACCGCCTGTTCAACTGCTTCTCATCGTACTGCTACTTCGATATAACGGAGATCGACGGCGTTAATACCAACGAGCTTTACAACGCCGTCCAGCTCTACCTCAGCTCCTCCGTCTCCATCACCGGGAACCGCCTCAGCCTCACCCGCGCTCTCAACTCCAGCGGCTTCACCTTCGGCCTCGCCAACAATGACAGCATCGTCGACAACTTCAACGGCGTCAATGTGCTGTGGGAACACGTGGTCATGCAGAGGCAGGCCCAGACCTTCTCGTGGCGGCCGCTGCCGGACGAGAAACGAGGGTTCACGCTCCGAATCATGAAGAAAGATAAATCTCTGATTCTCAACTCCTACTTGGATTACATTATGGAGAAAGCGAATGAGATTAGGAGGAAGAATCAGGAACGGTTATTGTACACGAATTCAAGAGGCGGTTCCTTGGACTCTAGGGGTCACCCTTGGGAATCGGTGCCGTTCAAGCATCCGAGCACGTTCGATACTTTAGCGATGGACCCTGAGAGGAAGGAGGAGATCATGGAAGATCTGCAAGATTTCGCGAGCGGTCAATCGTTCTACCAGAAGACGGGTCGGGCTTGGAAGAGAGGTTACCTTCTGTACGGCCCACCCGGAACCGGAAAATCCAGTATGATAGCCGCAATGGCGAATTATCTCGGCTATGATATATACGACTTGGAATTGACTGAGGTTCACAACAATTCAGAGTTGAGGAAGCTTCTGATGAAGACGAGCTCTAAATCCATCATTGTGATCGAAGACATTGATTGCTCAATCAACTTGACCAACAGGAAGAAGAATAGTAACAATACTAGTTCCAGGAACTACTGTGATCCTGCCGCTGAGTTACGAGGTGCTTGTGGTGGCTCTGCTTGTGGTGAAGATGGTGGGAATTCAATAACGCTTTCTGGGTTGTTGAATTTCACTGATGGGTTATGGTCTTGTTGTGGGAGCGAGAGGATTTTCGTGTTCACAACCAACCACATTGAGAAGCTGGACCCTGCTCTGTTACGAAGTGGGAGAATGGATATGCACATTTTCATGAGCTACTGTTCATTCTCATCTCTGAAGATTCTTCTGAAGAACTATCTGGGATATGACGAAGGTGATTTGGATGTGTCAGTGATGAAGGAATTGGAGCATGTTATCGACAAGGCACGGATGACTCCGGCGGATATCAGCGAGGTTCTGATCAAGAGCCGGCGGTTCAAGGAGAAAGCAGTGAAGGAGTTGTTGGAGACACTGAAACTGGCAGCAGAAAGGAACCAAAAAAATGGGGTTCTGAGAACGAGTGGTGGGGTGGAAGACGAAGAAGAAGAGCAAGAGAAAAGAGCTCTGGAGAGTCCTAAAGAAGAGTCAGAGATAGAGCACAGTTGCAGCAAGCGAGGTGAAGGAGGAGAAGAGGAGAAAGAAGAGAAGATCAAATAA 1554 0.4916 MRDFWTSLASILGVFAFCQTLLQTVFPPELRFATVKFFNRLFNCFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRALNSSGFTFGLANNDSIVDNFNGVNVLWEHVVMQRQAQTFSWRPLPDEKRGFTLRIMKKDKSLILNSYLDYIMEKANEIRRKNQERLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPERKEEIMEDLQDFASGQSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKKNSNNTSSRNYCDPAAELRGACGGSACGEDGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFSSLKILLKNYLGYDEGDLDVSVMKELEHVIDKARMTPADISEVLIKSRRFKEKAVKELLETLKLAAERNQKNGVLRTSGGVEDEEEEQEKRALESPKEESEIEHSCSKRGEGGEEEKEEKIK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1226 517 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Alju06g1226 517 Pfam ATPase family associated with various cellular activities (AAA) 241 391 IPR003959 GO:0005524|GO:0016887
Alju06g1226 517 PANTHER BCS1 AAA-TYPE ATPASE 7 464 - -
Alju06g1226 517 MobiDBLite consensus disorder prediction 468 517 - -
Alju06g1226 517 SMART AAA_5 236 394 IPR003593 GO:0016887
Alju06g1226 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 456 IPR027417 -
Alju06g1226 517 CDD RecA-like_BCS1 215 390 - -
Alju06g1226 517 Gene3D - 192 392 IPR027417 -
Alju06g1226 517 MobiDBLite consensus disorder prediction 473 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1226 Alju-ChrAlju06 12471976 12473529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1226 210 459 Calmodulin-binding Proteins AT3G56690 24.031 7.37e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1226 06 12471976 12473529 Alju06g1226 06 12471976 12473529 ECH