Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1207 ATGGGTGATCGAGGGACCACTACTCGGGTCTCTAGAAGGGTTTGTATAGACACGTGGCAGCAGAGTAATCATAGCGAGAAAGAGAAAGTGATGATGACATCAGCAGTCTGGCAGAAGAAAGAGCGCAGTGGCGGCGATGAGCAGAAGATAGTAAGGCGTCGCAGCAATCAGCTGTTCCCACCTTCACCCTCTTACACCCCTCCCCGCTTCCTCTATATCTGGAGCACCGTCGATGCCTCGCCGGATGCGGCTGTCGGAGGTGGTGGTGCAGCCAACAACGACCTCTCCGTCTTCGCCGAAGCCGCCCCCAAGTTCGAGGACTTCCTGGGCGGCGCCTCCTCCTCCGCTACGTCGGTCACAGCTGCAGTACCCACACCGCCTCACTTCCCCACCGACAACGTCTTCGGTTCTGAGCTCAAAACCATAGCCGCCGGCTTCCTCCCCGGCTTGGCCGTCGCTGAGAAATCGCAGCCGCAAAAGCAGTCGCTGGCTCTGGCCGTGCCGTCTTCTAAGAAAACCGCGGACACCTTTGGCCAACGCACCTCCATCTACCGCGGCGTCACTCGGCATAGATGGACGGGGAGATATGAAGCTCATCTATGGGATAATAGTTGCAGAAGAGAAGGCCAAAGTAGGAAAGGAAGGCAAGGTACTCAGGAAGAAGCTGCTGAAGCATATGATATAGCAGCCATAAAATTCAGAGGACTAAGTGCAGTGACCAACTTCGACATGAGCCGATACGACGTGAAGAGCATAGCCAACAGCAATCTACCAATAGGAGGATTCTCATCCTCCAAAACCAGAAACTTGTCAGATTCTTCTGTAGCATCAGACAACAGCAAAAGCAACGAGGGAAGCCGATCAACAACCGATAACAACAACAACAACAACATCATCATCGACCGAGATCAATCATCCTCATCAGCTTCCAACCTCAGCTTCGCCATACCCATAATCAAACAAGACCCTACCACTATAGATTACTGGTCCAATATCTTCGGTTACCAAAATCACTACAACAACACTACTACTCCTAACAATGTTTCAATTGCCTCACCTTCACAAAACTACAATAATGGCGCATTCGGCTTGGGGTTACAGAGAAATAACAACAACAGTGCACTTATGGTTGGGGGTGTGATTGTTCAGAACATTCAGCAGCAGCAGCAGCAAAGTGGAAGCAATAATAACAATAGTTCTGGAACTGGGGATTCAAGTTCAAGTTCAGGGATTCCATTGGCCACACCAGTAGGTATACATAGTAATAGTAGTTATGAGGATTCTTCTGGATATGGAAACTGGAGTATAGGGCCTGGTGGTCTGCACGCTTTCCAAACACACTCAAAAGGAAGTCTCTTTCAAACGCCAATATTTGGGATTGAATGA 1386 0.4986 MGDRGTTTRVSRRVCIDTWQQSNHSEKEKVMMTSAVWQKKERSGGDEQKIVRRRSNQLFPPSPSYTPPRFLYIWSTVDASPDAAVGGGGAANNDLSVFAEAAPKFEDFLGGASSSATSVTAAVPTPPHFPTDNVFGSELKTIAAGFLPGLAVAEKSQPQKQSLALAVPSSKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVKSIANSNLPIGGFSSSKTRNLSDSSVASDNSKSNEGSRSTTDNNNNNNIIIDRDQSSSSASNLSFAIPIIKQDPTTIDYWSNIFGYQNHYNNTTTPNNVSIASPSQNYNNGAFGLGLQRNNNNSALMVGGVIVQNIQQQQQQSGSNNNNSSGTGDSSSSSGIPLATPVGIHSNSSYEDSSGYGNWSIGPGGLHAFQTHSKGSLFQTPIFGIE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1207 461 Gene3D AP2/ERF domain 183 245 IPR036955 GO:0003700|GO:0006355
Alju06g1207 461 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 137 216 - -
Alju06g1207 461 MobiDBLite consensus disorder prediction 387 419 - -
Alju06g1207 461 PRINTS Ethylene responsive element binding protein signature 225 245 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 PRINTS Ethylene responsive element binding protein signature 184 195 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 MobiDBLite consensus disorder prediction 263 301 - -
Alju06g1207 461 CDD AP2 182 245 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 ProSiteProfiles AP2/ERF domain profile. 183 243 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 Pfam AP2 domain 183 235 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 SMART rav1_2 183 249 IPR001471 GO:0003700|GO:0006355
Alju06g1207 461 SUPERFAMILY DNA-binding domain 182 245 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1207 Alju-ChrAlju06 12299920 12305789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1207 167 461 AP2-EREBP Transcription Factor Family AT5G57390 35.216 1.77e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g1207 AP2 1.6e-08 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1207 06 12299920 12305789 Alju06g1207 06 12299920 12305789 ECH