Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1206 ATGAAGTATATTAGCAGCAACAGCTTCAAGCGTCTCTTCTCCTTCAAACGACGCAGCTTTGGGGAACAATTTTTGAGCCCTGAAGACAAAGAAACTCCTGAAAGACCCACTTGGAAATGCTTCTCATATCAAGAACTATTTGATGCCACCAATGGCTTCTGCTCTGAGAATCTGGTTGGAAAAGGAGGGCATGCAGAGGTTTATAAGGGGAAATTAGAAGATAATGAGGAAATTGCAGTGAAGAGGCTCACAAAAAGCTGTAATGATGAGAGGAAAGTGAAGGAATTTCTGACAGAGATTGGAACAATTGGCCATGTTTGTCATCCAAACGTTTTACCTCTTCGTGGTTGCTGTATTGACAATGGGCTTTACCTTGTCTTTGAGTTTTCCTCTAGAGGCTCTGTTGCTTCTCTTCATGATGAGAATGAGCCTGTAATGGAATGGAAAATAAGGCATAAGATTGCTCTTGGGACAGCACGTGGCCTCCATTACTTGCACAAAGGTTGCCAAAGAAGGATAATTCACAGAGACATTAAGGCCTCCAATGTTCTTTTGGCTTCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCCAAATGGCTTCCTTCTCAGTGGACTCATCATTCCATTGCCCCAATTGAAGGCACATTTGGGCACTTGGCTCCTGAGTATTACCTACATGGAATAGTGGATGAGAAAACTGATGTATTTGCATTTGGGGTGTTTCTGCTAGAACTCATCTCTGGGAAGAAACCTGTGGATGGATCAAACCAGAGTTTACACAAATGGGCTAGGCCAATATTGAAGAGAGAAGAGCTAGAGAAAGTGGTAGATCCAAGGCTTGAAGGAGCTTATGATGTTTCAGAGTTAACAAGGCTTGCTTTTGCAGCTTCTTTGTGTATCCGATCATCTTGCACTTGGAGACCCACCATGACTCAGGTATTAGCGATAATGGAGGAGGGAGAAATAGATAAAGATAAATGGACCATGCAAGAGGAGGAGGAGGAAGAGGATGTGGTATGGGGTTTTGAGGATTTGGAATATGAATATGATAGTTTGTCCTCAATGTCTCTCCCTGACTCCGTTACAAGTAATTAG 1101 0.426 MKYISSNSFKRLFSFKRRSFGEQFLSPEDKETPERPTWKCFSYQELFDATNGFCSENLVGKGGHAEVYKGKLEDNEEIAVKRLTKSCNDERKVKEFLTEIGTIGHVCHPNVLPLRGCCIDNGLYLVFEFSSRGSVASLHDENEPVMEWKIRHKIALGTARGLHYLHKGCQRRIIHRDIKASNVLLASDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLELISGKKPVDGSNQSLHKWARPILKREELEKVVDPRLEGAYDVSELTRLAFAASLCIRSSCTWRPTMTQVLAIMEEGEIDKDKWTMQEEEEEEDVVWGFEDLEYEYDSLSSMSLPDSVTSN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1206 366 FunFam Putative receptor-like serine/threonine-protein kinase 131 343 - -
Alju06g1206 366 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Alju06g1206 366 PANTHER OS08G0249100 PROTEIN 23 344 IPR046958 -
Alju06g1206 366 Gene3D Transferase(Phosphotransferase) domain 1 131 346 - -
Alju06g1206 366 SUPERFAMILY Protein kinase-like (PK-like) 38 327 IPR011009 -
Alju06g1206 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Alju06g1206 366 Gene3D Phosphorylase Kinase; domain 1 22 129 - -
Alju06g1206 366 ProSiteProfiles Protein kinase domain profile. 53 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1206 366 SMART serkin_6 53 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1206 366 FunFam Putative receptor-like serine/threonine-protein kinase 22 129 - -
Alju06g1206 366 Pfam Protein kinase domain 56 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1206 Alju-ChrAlju06 12274568 12278005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1206 39 329 Receptor kinase-like Gene Family AT1G60800 43.000 1.25e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju06g1206 Pkinase 1.4e-40 CL0016