Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1203 ATGTATTCAAATTCGTGGCTGGTATTTTTAATTGATACACCAATTGGTTGGAATATACAGAGAGCAAACATGGCTAAAGGCTTGAAGAAAAGCAACTATGAAGTGCTGGGAATGTGTTGTAATTCAGAGGTTGCTCTGATTGAAAAGATTCTGAAGGGTCTTCATGGAGTTAAGGAGATTTCAGTCATGTTCCCGACCCGAACCGTCACCGTAATCCATGATCTTGATCTAATCTCTGAGTCACAAATCACTGATGCACTGAACATGGCAAGGCTTGAAGCTAGTTTGAAACCTGAAGGAGAGTCTAAGCATGAAACGAAATGGCCAGCACCAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTATGTTTATCAACCTTTGGAATACTTTGCCATTGGTGCTGTTGTTATTGGCTCCCAAAGAATTATATTAAGAGGCATAGCTTCCATCAGGAATCTCTCTCTTGATATCAACATTTTGGTTCTATTGGCAGTGTTTGGTACTCTTGCTGTGGGAGATTTCTGGGAAGCTGGAATCATCACCTTCCTATTCTCCATTGCTCAATGGCTAGAGACAGTAGCCAGTTACAAGGCTATGGTCACCATGTCCTCTCTAACAAACATAGCTCCTCAAAGGGCCATTATTGCTGAGACGGGGGAACAAGTTGATGTCAATGAAGTTAAGATAAACACTGTCCTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGCATTGTCGTCGAAGGGAAATGTGAAGCCGACGAAAAGATGTTGACAGGAGAGTCATTCCCTGTCACCAAAGAGTTAGGTTCAACTGTTTGGGCTGGCACTATTAATCTAAATGGTTATATCAGTGTGAAAACAACTGCATTGGCAACAGACACAGCAGTGGCAAGAATGACAAAGCTTGTTCAAGAGGCTCATGGCAGAAAATCCAGAGCTCAAAGATTCATAGATACCTGTGCAAAGTACTATGTACCTGGGGTTTTCCTGATATCAGTTGGTGTTGCTGTGATTCCCATAGCATTAAGAGTTCCCAACATTAAGTATTGGTGTCACATGGCTATTGTGGTTTTAGTAAGTGCATGCCCTTGTGCTCTTATTCTCTCCACACCAGTTACAATCTTCTGTTCCCTCACAAAAGCTGCCACAAGTGGGTTACTTCTTAAAGGTGGAGATTATGTAGAAGCACTTGCTGGGATTAAGATTCTGGCTTTTGATAAGACAGGCACATTAACAAAAGGGCAGTTCACTGTCACAGATTTTTCTACTGTTGGAGATGATATTAGCATTCAACTGTTACTTTACTGGGTTGCTAGTATTGAGAGTAAATCAAGTCACCCTATGGCAGCTGCACTTTTGGAATATGGAAGGCTACATGGTATCGAACCAATCCCCGAGAATGTGGAGGATTTTCAGAATTTTCCAGGCGAAGGAGTTTCCGGTAAAATCGATGGGAAAGAAGTCTATATTGGCAATAGGAAAATATGTGTGAGAGCTGGCTGTGAAAGTGAGTTTCTAACCAAGGAAGAAAGAAATGGTTATATATGCTGTGGACCAAGTCTAGTTGGAGTGTTCAGCCTATCAGATGCATGCAGATCCGGAGCTTTAGAAGCAATTGAAGAGCTTAAGTCATTAGGCGTGAAATCAGCCATGCTGACAGGAGATAGCACTCATGCTGCTACACTTGTTCAGACTCAGCTGAATCATGCTCTAGACATAGTTCATGCTGGGCTTCTCCCACATGAAAAGGCAGTGATCATAGAGAATTTCAAGAAAGAAGGGCTCACAGCCATGATTGGAGACGGTATAAACGACGCTCCAGCATTAGCCACAGCTGATGTGGGCATCTCAATGGGAATCTCAGGTTCAGCTCTGGCAATAGAGGCAGGCCACGCAATTCTCATGTCAAACGACATCAGGAAGATACCTGAAGCCATTCATCTTGCAAGAACAACTTTCAGAAAGCTTGTTCAGAATGTCGTTTTCTCCATTATCACAAAAGCTTTGGTCCTAGCTCTGGCTCTAGCAGGATATCCACTGGTTTGGCTTGCCGTTTTGACTGATGTCGGCACCTGCTTGCTTGTGATTCTCAACAGCATGTTACTTCTGAACGAGAAAAAAAACAACAAGAAGAACAAAAAAGAAACCAGGAAACCCAAATATGGGTTGTTCATAGAGGATAATAATAATAATAATAAGAAGAACGAGCCATTACTTGGAAAGCAAACTGATTGTGGTGAAGGATGCTGCAGCAATGTCTCTCGTGAAGTGATCATTCCTAGTACTGCAACAACCGAATGCGAAAAATCTTGCTGTTCAAATTCTGGGCTTTTGAATCTGAGCTTGCTGGAGGAACCTTCATGCAGAAAGAAGAGTAGCTGTAGCCCTAATTGTCGCAAGGTGCAGAACAGAGAAGTGGGGGTTAGTACAGAGAAGTGTGGTTCAGGGACATGTGGGAATCAACAATGCTACAAAGAATCCAGGAAGATTTGCTGCAATGATCGAGTTAAAATACCAGAAATTGTTATTGAGTGA 2556 0.4241 MYSNSWLVFLIDTPIGWNIQRANMAKGLKKSNYEVLGMCCNSEVALIEKILKGLHGVKEISVMFPTRTVTVIHDLDLISESQITDALNMARLEASLKPEGESKHETKWPAPSTLACGLLLALSFLKYVYQPLEYFAIGAVVIGSQRIILRGIASIRNLSLDINILVLLAVFGTLAVGDFWEAGIITFLFSIAQWLETVASYKAMVTMSSLTNIAPQRAIIAETGEQVDVNEVKINTVLAVKAGDAIPLDGIVVEGKCEADEKMLTGESFPVTKELGSTVWAGTINLNGYISVKTTALATDTAVARMTKLVQEAHGRKSRAQRFIDTCAKYYVPGVFLISVGVAVIPIALRVPNIKYWCHMAIVVLVSACPCALILSTPVTIFCSLTKAATSGLLLKGGDYVEALAGIKILAFDKTGTLTKGQFTVTDFSTVGDDISIQLLLYWVASIESKSSHPMAAALLEYGRLHGIEPIPENVEDFQNFPGEGVSGKIDGKEVYIGNRKICVRAGCESEFLTKEERNGYICCGPSLVGVFSLSDACRSGALEAIEELKSLGVKSAMLTGDSTHAATLVQTQLNHALDIVHAGLLPHEKAVIIENFKKEGLTAMIGDGINDAPALATADVGISMGISGSALAIEAGHAILMSNDIRKIPEAIHLARTTFRKLVQNVVFSIITKALVLALALAGYPLVWLAVLTDVGTCLLVILNSMLLLNEKKNNKKNKKETRKPKYGLFIEDNNNNNKKNEPLLGKQTDCGEGCCSNVSREVIIPSTATTECEKSCCSNSGLLNLSLLEEPSCRKKSSCSPNCRKVQNREVGVSTEKCGSGTCGNQQCYKESRKICCNDRVKIPEIVIE 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1203 851 Pfam E1-E2 ATPase 221 389 - -
Alju06g1203 851 NCBIfam HAD-IC family P-type ATPase 185 686 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju06g1203 851 ProSitePatterns E1-E2 ATPases phosphorylation site. 413 419 IPR018303 -
Alju06g1203 851 CDD HMA 33 95 IPR006121 GO:0046872
Alju06g1203 851 Gene3D - 402 657 IPR023214 -
Alju06g1203 851 Gene3D - 200 314 - -
Alju06g1203 851 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 25 713 - -
Alju06g1203 851 SFLD p-type atpase 394 658 IPR044492 -
Alju06g1203 851 Gene3D - 25 97 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 260 274 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 411 425 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 630 642 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 552 562 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 606 625 - -
Alju06g1203 851 PRINTS P-type cation-transporting ATPase superfamily signature 530 541 - -
Alju06g1203 851 SFLD Haloacid Dehalogenase 394 658 - -
Alju06g1203 851 Pfam haloacid dehalogenase-like hydrolase 407 620 - -
Alju06g1203 851 NCBIfam cadmium family heavy metal-translocating P-type ATPase 162 710 - -
Alju06g1203 851 CDD P-type_ATPase_HM 112 707 - -
Alju06g1203 851 SUPERFAMILY HMA, heavy metal-associated domain 26 98 IPR036163 GO:0046872
Alju06g1203 851 FunFam Copper-transporting ATPase 1, putative 200 314 - -
Alju06g1203 851 SUPERFAMILY HAD-like 410 707 IPR036412 -
Alju06g1203 851 FunFam Putative cadmium/zinc-transporting ATPase 3 422 538 - -
Alju06g1203 851 FunFam Putative cadmium/zinc-transporting ATPase 3 25 97 - -
Alju06g1203 851 ProSiteProfiles Heavy-metal-associated domain profile. 29 95 IPR006121 GO:0046872
Alju06g1203 851 ProSitePatterns Hypothetical cof family signature 2. 606 628 - -
Alju06g1203 851 SUPERFAMILY Calcium ATPase, transmembrane domain M 163 696 IPR023298 -
Alju06g1203 851 PRINTS Cadmium-transporting ATPase signature 197 217 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 PRINTS Cadmium-transporting ATPase signature 33 42 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 PRINTS Cadmium-transporting ATPase signature 276 292 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 PRINTS Cadmium-transporting ATPase signature 44 65 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 PRINTS Cadmium-transporting ATPase signature 295 309 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 Gene3D - 422 538 IPR023299 GO:0000166
Alju06g1203 851 Pfam Heavy-metal-associated domain 35 82 IPR006121 GO:0046872
Alju06g1203 851 NCBIfam heavy metal translocating P-type ATPase 162 709 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju06g1203 851 SUPERFAMILY Calcium ATPase, transduction domain A 224 310 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1203 Alju-ChrAlju06 12217494 12226499 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1203 25 842 Primary Pumps ATPases AT4G30110 53.357 0.0 880