Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1183 ATGAATAAGCCAATGGTAAGAATCAAAGGAAGCTACGTAGTAAGGCCTTGTGAAGCAACGTGGATTGGAACGATGGCCTTATCAGAATGGGATCAAATAGACTGCTTGACTCACGTTCCTGTCATCTTCTTCTACCGACCGGCGAACGCTTGGCTCTCGCCGCCGTCCGCCATTGCTGACACCCTGAAGCACTCTTTAAGCAGAGCTCTGGTGCCGTTTTATCCCTTGGCCGGTCGTTTGCAGTGGATAGGCAATGGACGACTTCAGCTTCAGTGCAACGCAATGGGGGCTCAATTTATCGAAGCTGAGTGCGATTCAAGTTTAGACGAGCTTTGTGACTCATCTCTGTCGTTTCAACCTGATAGCCTTTTCCCATCCATAGATTACAGCCTTCCAATTCATGAGATTCCTGTGTGTTTTGCTCAGCTTATCACATTTAAGTGCGGTGGCATCGGCATTGCTTTAGCATTTTCTCACGCAGTTGTTGATGGACCAGCTGCCATACACATGGTCTATGAGTGGGCAAGGCTTGCAAGAGGCGAGCCCCTACAAACACCCCCATTTTTGGACCGGAGTGTGTTTCGAGCCGGTCAACCACCATTGACATCACCACCACCAAGCCTTGATGATTATCCCGAGTATAAGAATCCGCCATTGTTACTTGGTCAGGTGGACAATTCAGAGGAAAGAAAGAAGAAATCAACAATGGCAATGTTGAGAATAACCAAATCTCAAGTGGAGCAACTGAGAAAGATGGCAAATGATGATAAGCCAATAATGGCTCGTGGGTTTACTCGGTTTGAGACAATATGTGGATATATTTGGAGAATCGCATGCAAGGCAAGGAAACTCAAAAAGGAGCAACCAACAGTATCAGCCATTTCCGTGGATTCGAGGAATTTCATGAGGCCTAAACTACCAAGAGAGTACTTTGGGAATGCAAATTTTAATGTGACAGCTCAAAGTGTAGCCGGTGATCTCACGTCTAAGCCATTAGGGTTTGCTGCAAGCAAAGTAAGAGAAGCCATAGAGAAAGTGACAAATGATATCGAGTATGTTAGGTCATGTATAGAGTTGTTGAAGAGCCAAAAGGACCTAACAAAGTTTCAAGATATCAATAAGGAAGAGGGGGCATTTTATGGAAACCCTAATATTGAGATTGTAAGTTGGCTGACATTACCTCTTTATGGGTTTGATTTTGGGTGGGGAAAGGAGCAATACATGGGGTTAGGATCTCATGGTACAGAAGGCAATTTTGTGCTTCTTCCCGGCATTGAAGGAGATGGTTCTGTTATAGTTGCTATGTGCCTCCAAGATGCTCATATGAATGCTTTTAAGAAGCATTTTTACGAGGACATAATCTCCACTACAATTGGGCTACGTGCAGCTTTGTGA 1395 0.4473 MNKPMVRIKGSYVVRPCEATWIGTMALSEWDQIDCLTHVPVIFFYRPANAWLSPPSAIADTLKHSLSRALVPFYPLAGRLQWIGNGRLQLQCNAMGAQFIEAECDSSLDELCDSSLSFQPDSLFPSIDYSLPIHEIPVCFAQLITFKCGGIGIALAFSHAVVDGPAAIHMVYEWARLARGEPLQTPPFLDRSVFRAGQPPLTSPPPSLDDYPEYKNPPLLLGQVDNSEERKKKSTMAMLRITKSQVEQLRKMANDDKPIMARGFTRFETICGYIWRIACKARKLKKEQPTVSAISVDSRNFMRPKLPREYFGNANFNVTAQSVAGDLTSKPLGFAASKVREAIEKVTNDIEYVRSCIELLKSQKDLTKFQDINKEEGAFYGNPNIEIVSWLTLPLYGFDFGWGKEQYMGLGSHGTEGNFVLLPGIEGDGSVIVAMCLQDAHMNAFKKHFYEDIISTTIGLRAAL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1183 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 450 - -
Alju06g1183 464 Gene3D - 2 214 IPR023213 -
Alju06g1183 464 Pfam Transferase family 5 451 - -
Alju06g1183 464 FunFam Tryptamine hydroxycinnamoyl transferase 222 450 - -
Alju06g1183 464 Gene3D - 222 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1183 Alju-ChrAlju06 11965128 11967058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1183 6 451 Monolignol Biosynthesis Gene Families AT5G48930 35.412 9.27e-95 291