Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1150 ATGGTTGTGTGGCGGAGGTCAAGGATTAATGGTGACTCTTGTGACTGTGCAGTGGAACCTCCTTCACATTCTCAAGTTATTCAGGTCCCAATGGCTCAGCTTAGTGGCTTCGGAGGAGCTAAGTTTTTTGTGGTAGTGATAATATTGCTCATCCTATTGTTAATCCTTGTGTTTGTGTGTCGGAAGCGTATCAAACCAGCATTACAGATGAAAGCAAAACCTCCAATTGAGGTAATGGAGATAATAGCTCCTTCAAAGAAGCAGCAAGGGTCAATGGACTTCTTTAGTGGCAGTGTTCAAGAAATGAGCTATTTTGACGATCACACCCTCAAGAAGGCAACAATGAATTTTCACCCTGATAATTTTCTTGGAAGTGGTGGATATGGTCCTGTTTTTAGGGGGAAGTTGGCAGATGGGAGGCTAATTGCAGTGAAGACATTGAATCTGAACAAAGCACAACAAGGAGAAAAACAATTTCTGACGGAAGTGAGACTGATTACAAGCATCCAACACAAAAATCTTGTTCGTCTCCTCGGATGCTGCACCGATGGGCCTCAAAGGATCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATAATCAATGGAGACAGTGATCAGTTTCTGGATTGGAGCACTAGGTTCCAAATCATTGTTGGAATTGCACGGGCGTTGCAATACCTGCACGAGGATTCACACATGAGAATCGTTCACAGGGATATTAAAGCAAGCAATATTCTTCTGGACGACAAGTTTCACCCCAAGATTGGAGACTTTGGACTGGCTAGGTTCTTCCCTGAAGACCAAGATTGCCTCAGTACCCAAATTGCTGGAACACTAGGTTACACGGCTCCTGAATATGCTATAAAAGGAGAACTATCAGAAAAGGTAGACATATACAGTTTTGGGGTTCTATTGCTCGAAATCATCAGTTGTAGAAAGAACACAGATTTTACTTTACCATCAGGAATGCAGTACCTTCCTGAATACGCGTGGAAGCTCTATGAGAAATCGATGCTGATCGATCTGATAGATCCGAAACTGCGAGAACACGGGTTTGTAGAGAAGGATGTAATGCAAGCAATTCATGTGGCATTGTTGTGTATTCAATCTAGTCCAAATCTAAGGCCTCCCATGTCAGAGATTGTAGCATTGTTAACCTTCAAAATTGAAATGGTTAAGACTCCAATGAGACCAATATTCCTTGATCTGAGGCATAAAGTGGCTGTTGCTGATAAAGATAAGGATGATGATTTAGAGAATTGA 1272 0.4198 MVVWRRSRINGDSCDCAVEPPSHSQVIQVPMAQLSGFGGAKFFVVVIILLILLLILVFVCRKRIKPALQMKAKPPIEVMEIIAPSKKQQGSMDFFSGSVQEMSYFDDHTLKKATMNFHPDNFLGSGGYGPVFRGKLADGRLIAVKTLNLNKAQQGEKQFLTEVRLITSIQHKNLVRLLGCCTDGPQRILVYEYMKNRSLDLIINGDSDQFLDWSTRFQIIVGIARALQYLHEDSHMRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQDCLSTQIAGTLGYTAPEYAIKGELSEKVDIYSFGVLLLEIISCRKNTDFTLPSGMQYLPEYAWKLYEKSMLIDLIDPKLREHGFVEKDVMQAIHVALLCIQSSPNLRPPMSEIVALLTFKIEMVKTPMRPIFLDLRHKVAVADKDKDDDLEN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1150 423 Gene3D Transferase(Phosphotransferase) domain 1 194 398 - -
Alju06g1150 423 CDD STKc_IRAK 123 389 - -
Alju06g1150 423 Gene3D Phosphorylase Kinase; domain 1 87 193 - -
Alju06g1150 423 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 412 - -
Alju06g1150 423 ProSiteProfiles Protein kinase domain profile. 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1150 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Alju06g1150 423 SMART serkin_6 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1150 423 Pfam Protein kinase domain 119 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1150 423 FunFam Cysteine-rich receptor-like protein kinase 10 81 193 - -
Alju06g1150 423 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 194 398 - -
Alju06g1150 423 SUPERFAMILY Protein kinase-like (PK-like) 96 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1150 Alju-ChrAlju06 11229070 11233417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1150 44 404 Receptor kinase-like Gene Family AT1G56120 44.687 8.38e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju06g1150 Pkinase 3.1e-46 CL0016