Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1146 ATGGCAATTGCAGCTTCAACATCATCCTCCACCATGAGGATCAGCCATAGCCACAACAACAACGACCTCAACCACGACCACGACGACGAGAGGAGGCAACCGCCACCGGCAGCAGAGACAGACGACGGTCACGAGCAAGACATGGTCATGCCTGGGTTTCGATTCCACCCAACAGAAGAAGAACTGGTAGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCCTTTCAATGTTGAACTCATTACTTTCCTTGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATAGGGGAGAAGGAATGGTACTTTTATGTGCCGAGAGATAGGAAGTATCGGAACGGCGACCGGCCGAACCGGGTAACGACTTCAGGGTATTGGAAGGCCACCGGAGCTGATAGAATGATCAAAACAGATGGCTTCAGATCCATCGGACTCAAGAAAACCCTAGTCTTTTACTCTGGTAAAGCTCCTAAAGGGATTAGAACCAGTTGGATTATGAACGAGTATCGCTTGCCTCACCACGAAACCCAACGATTTCAAAAGGGTGAGATATCTCTTTGTCGAGTGTACAAGAGAGCAGGCGTAGAGGACCATCTCTCTCTCCCTAATTGTCTCCCCATAACATCATCATCAAGGGCTTCACACAATAAGAACAAGCACAACGCTAACCAATTTATGGTTCATCAGAGCAACATCAGATTCCTGGGACAACAACAATCACAACATCATCATGATCAATATCAAACCACAGACCAAGTTGTCGAAAAAATGAATCATCAAACTGAGGAAAACAGTACTACTAGTGATGATGCCAACAAGTACAACAACAATCTGCAGCAGCAACAACCAAAGCAAGCACAACACCACACAGAAGCCGCAATAGCAGCTTCCTCCTTCTTCCCCGAAGGCTCAACTACTTCTAATAATAATTCATCCTCATTACCATCAAATGACAACATTAATACTGCAATAATGGTGGAAGATGATCATCTTAATCGGCTAGCAGTGAGTTATAATCAGCAGTTACAGTGCTACAATAACATTTATGCTTCTGCTGCTTCTTCTCAAGGTCATCAGCAATATAATTATCAGCCCCACATGATGATGCAGTTCTCTAATAATATTGTGTTGCAGCCACAACAATCATCAATGCCTCTTCATAATTCGCTTCCCATTAACTCTCTTTCTGACAGATTGTGGGAGTGGAATCCAATCCCTGAGCCAACAAACCGAGACTTCACCACCATGGCCTTCAAGTAA 1272 0.4505 MAIAASTSSSTMRISHSHNNNDLNHDHDDERRQPPPAAETDDGHEQDMVMPGFRFHPTEEELVEFYLRRKVEGKPFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRFQKGEISLCRVYKRAGVEDHLSLPNCLPITSSSRASHNKNKHNANQFMVHQSNIRFLGQQQSQHHHDQYQTTDQVVEKMNHQTEENSTTSDDANKYNNNLQQQQPKQAQHHTEAAIAASSFFPEGSTTSNNNSSSLPSNDNINTAIMVEDDHLNRLAVSYNQQLQCYNNIYASAASSQGHQQYNYQPHMMMQFSNNIVLQPQQSSMPLHNSLPINSLSDRLWEWNPIPEPTNRDFTTMAFK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1146 423 MobiDBLite consensus disorder prediction 19 49 - -
Alju06g1146 423 FunFam NAC domain-containing protein 35 58 199 - -
Alju06g1146 423 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
Alju06g1146 423 MobiDBLite consensus disorder prediction 1 50 - -
Alju06g1146 423 MobiDBLite consensus disorder prediction 1 18 - -
Alju06g1146 423 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Alju06g1146 423 MobiDBLite consensus disorder prediction 261 296 - -
Alju06g1146 423 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
Alju06g1146 423 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 46 300 - -
Alju06g1146 423 SUPERFAMILY NAC domain 48 195 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1146 Alju-ChrAlju06 11174306 11176846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1146 1 423 NAC Transcription Factor Family AT2G02450 47.085 5.59e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g1146 NAM 3.2e-34 No_clan