Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1145 ATGGGAAACTGTCTGGCTCGTCAGTCTAATTCTACAAATTCTCATCGCAACTCCAACAATGGCGCCAACAACCACCAATTGGGGAGCAGCCAACTACCCATTAGACAGAGTACTTCAAGACTGTTGCAGAGTACAAGCAATTCCACTTTGCTGGGACGAAGCAGCATGTCTGCAGGAAATAGCAGGCTATTTGGACCAAGTAGCAGTAATACATACTCAACCAGCAACACAAATACATCTCTTTTAGGCTCTGATAGCAGCCAGATTTTAAAAGCAAGAGGTGAAGAGGATGAGTTTCCTAATGGGCAGATCTTGGATGTGGCAAACTTGAGAGAATTCACTTCTGAGGAACTGAAGGCAGCAACTAAAAATTTCAGAGCTGACTCTGTAGTTGGAGAGGGAGGCTTTGGCACAGTGTACAAGGGTTTGCTTAAAGGGAGAGCATCATCAACAGCTACAAGAGATGGACGATTGGCCGTTGCAATCAAGAGATTGAACTCTAATAGCACACAAGGAGTTATGGAATGGCAGTCAGAGGTGAACTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTCAAGTTGTTTGGATTTGGAAGGGAAAATGGAGAGTTATTTCTGGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCACCTATTCGGAAGAGGTTCAAATGTACAGCCACTTCCATGGGACACAAGGTTAAAAATTATAATTGGAGCAGCTAGGGGCCTAGACTTCTTACACTCATTAGAGAATAGAATCATATACAGAGATTTTAAGCCAGCCAATATCCTACTTGACAAGAACTACAATGTCAAGTTATCAGACTTTGGTTTGGCCAAAGCGATTCCTTCTGATGATAGAACTCATGTGACAACAAGGGTTATGGGATCTCACGGTTATGCTGCGCCTGAGTACGTTGCCACAGGTCACTTGACTGTGAAGAGTGATGTGTATGGATTTGGAATTGTTTTGGTGGAGATACTGACAGGCAAAGCAATACATGATATTCTTAGGCATGTGGGTCAGGGCCAATCATTGATGGACTGGCTCAAATCAAATTTGTTGAGTAAAGGGAAGATGATAAACACAATGGACAGTAGATTGGAGGGGAGATATCCACCTAGGTTAGCATTACAAGTAGCTCAGCTAGCTCTTAAATGTGTCCAAACGGAACATAGATTTAGGCCATCAATGAGGGAAGTTGTCGAGACATTAACAAAAGTAGAGGCAGCTCAACTAAATGGTCGCCCCCATGGAGTTGGGAAATCACACAGCAGAGGCTGTCCATTGATTTCGGCATCAGCAATCTACATATTCATTGACTTATGGTTGGCTGAACTTCACGTTCTCATTGTTTATATAACTACTGGACTTAAGAAACTAAACCATCTGCATAGACATAGCCATTGGACTTGCAACGTCAAAATGGCAAGCATGATCAAAAACAGAGTCATTGCCAAAGTCAATACCGATGTGACTTTGGCCTATTCTATGTCGTTTGAAAGCAGAGCTTCATGCAGCCAAATCTTTGTTGGATTTGATTAG 1554 0.4266 MGNCLARQSNSTNSHRNSNNGANNHQLGSSQLPIRQSTSRLLQSTSNSTLLGRSSMSAGNSRLFGPSSSNTYSTSNTNTSLLGSDSSQILKARGEEDEFPNGQILDVANLREFTSEELKAATKNFRADSVVGEGGFGTVYKGLLKGRASSTATRDGRLAVAIKRLNSNSTQGVMEWQSEVNFLGRLSHPNLVKLFGFGRENGELFLVYEFMHKGSLANHLFGRGSNVQPLPWDTRLKIIIGAARGLDFLHSLENRIIYRDFKPANILLDKNYNVKLSDFGLAKAIPSDDRTHVTTRVMGSHGYAAPEYVATGHLTVKSDVYGFGIVLVEILTGKAIHDILRHVGQGQSLMDWLKSNLLSKGKMINTMDSRLEGRYPPRLALQVAQLALKCVQTEHRFRPSMREVVETLTKVEAAQLNGRPHGVGKSHSRGCPLISASAIYIFIDLWLAELHVLIVYITTGLKKLNHLHRHSHWTCNVKMASMIKNRVIAKVNTDVTLAYSMSFESRASCSQIFVGFD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1145 517 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 211 420 - -
Alju06g1145 517 MobiDBLite consensus disorder prediction 1 83 - -
Alju06g1145 517 PANTHER OS01G0588500 PROTEIN-RELATED 51 412 - -
Alju06g1145 517 Gene3D Phosphorylase Kinase; domain 1 109 210 - -
Alju06g1145 517 FunFam receptor-like protein kinase FERONIA 91 210 - -
Alju06g1145 517 ProSitePatterns Protein kinases ATP-binding region signature. 131 163 IPR017441 GO:0005524
Alju06g1145 517 CDD STKc_IRAK 131 410 - -
Alju06g1145 517 ProSiteProfiles Protein kinase domain profile. 125 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1145 517 SUPERFAMILY Protein kinase-like (PK-like) 110 409 IPR011009 -
Alju06g1145 517 Pfam Protein tyrosine and serine/threonine kinase 128 408 IPR001245 GO:0004672|GO:0006468
Alju06g1145 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Alju06g1145 517 Gene3D Transferase(Phosphotransferase) domain 1 211 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1145 Alju-ChrAlju06 11153245 11159345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1145 110 409 Receptor kinase-like Gene Family AT3G58690 45.724 4.07e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju06g1145 PK_Tyr_Ser-Thr 4.2e-47 CL0016