Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1121 ATGTCTGCGTGTTTAAGCGGAGCTAGTGGAAGAACTTATGGGTTCGATTTCGATTTTGTCAAATCTCCATCCACATCGACCCGAACCTCGCATACATCTTCTCCTTCTTCAACCATCTCGGAATCGAGTGATTCTCCACTTGCTATATCCACTCGTAAATCTCGAACCCCTCGAAAGCGACCCAATCAAACTTACAATGAAGCTGCGGCAATGCTTTCCACAGCTTACCCAAATCTCTTCCCCTCCGATAGCCTAAAAAAACCAGGCAAATTCACCAAAACAACCGATAATTTTGCGGATGAATCTTCAGAATTGTTTTTCCCTTTTCAAGTTTCTGATACCTCCTCTTTCCTAATTCAACACCAACCAATCCAACAGAAGGCTGCTGGTAATTTTCCGGTGGAGCCCAAAGCAGTTAATCTAACAGAAAAAGCGTGCCAGAGTCCGGGGGAGATTAGCTCACGAGTGACTACTACTCAAGAATTCGATGACGACTGCCTAGAAGATTTCGATGCTGAATCGATTCTCGATGAGGAAATCGGAGAGGGAATCGATAGCATCATGGGAAGCAGGGCTGAGGATTCACACGGCGCGTCTTGTCACGACGAACACGTGAATCCCTGGACTGTGGATTCGACGGGATTTAATTTTGGCGGGAAATTCGATTTCCGGCTACGAGCTCTCCGTGGAGTCGATGAAGGGAATTATTGTTGGGGCTTTCCCGCCGTTGTCAATATGCTTGAAATCTCACCGGAAATAAAAAAGCCTATGCCGCCGGCATCGGTTTCGCCGGAGAAGAAAAAGAAGAAGACGAAGAAGGTGGAAAAGCTGACGAACATCGAATCGAAGATTCCGGAATTGCCGAAGGAGAGTTCGACTCCGAAGGTGAAATCGAATCCTGGTTTGCTGTTGAAATTGAATTACAACGAGGTTTTGAATGCTTGGTCTGACCGGAGTTCACCGTTCACCGGCGACAGTCCCGCCTCTGACGTGCCCGGAAATGATATCGCGGCACGGCTGGCGCAGATAGATTTGTTGTGGGAGAGCGGAGAAGGAGGGGTGATGAGAGAGGCCAGCGTTATGCGGTACAAAGAAAAGCGCCGTACACGTCTCTTCTCCAAGAAGATTAGATATGAAGTTAGAAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGGCGATTTTCTAGGAGGCCCAATTGTGGATCTAACGCACAAAGCAGAAAGTGTAAAGCAGGCCTTCCGTCCCATCAACACTCTCAATAA 1266 0.4795 MSACLSGASGRTYGFDFDFVKSPSTSTRTSHTSSPSSTISESSDSPLAISTRKSRTPRKRPNQTYNEAAAMLSTAYPNLFPSDSLKKPGKFTKTTDNFADESSELFFPFQVSDTSSFLIQHQPIQQKAAGNFPVEPKAVNLTEKACQSPGEISSRVTTTQEFDDDCLEDFDAESILDEEIGEGIDSIMGSRAEDSHGASCHDEHVNPWTVDSTGFNFGGKFDFRLRALRGVDEGNYCWGFPAVVNMLEISPEIKKPMPPASVSPEKKKKKTKKVEKLTNIESKIPELPKESSTPKVKSNPGLLLKLNYNEVLNAWSDRSSPFTGDSPASDVPGNDIAARLAQIDLLWESGEGGVMREASVMRYKEKRRTRLFSKKIRYEVRKVNADQRPRTQGRFSRRPNCGSNAQSRKCKAGLPSHQHSQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1121 421 ProSiteProfiles CCT domain profile. 356 398 IPR010402 GO:0005515
Alju06g1121 421 MobiDBLite consensus disorder prediction 394 421 - -
Alju06g1121 421 MobiDBLite consensus disorder prediction 256 275 - -
Alju06g1121 421 MobiDBLite consensus disorder prediction 382 421 - -
Alju06g1121 421 MobiDBLite consensus disorder prediction 23 62 - -
Alju06g1121 421 MobiDBLite consensus disorder prediction 23 52 - -
Alju06g1121 421 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 401 - -
Alju06g1121 421 Pfam CCT motif 356 397 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1121 Alju-ChrAlju06 10804950 10807643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1121 302 398 C2C2-CO-like Transcription Factor Family AT1G73870 46.847 4.15e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g1121 CCT 1.6e-16 CL0281