Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1105 ATGGCCGTCGGCAAAAACAAGCGAATCTCGAAGGGCAAAAAGGGTGGCAAGAAGAAGGCAGCTGATCCCTTTGCTAAGAAGGACTGGTATGATGTTAAGGCCCCTTCTTCTGTTTTCGAATTGAAGAATGTGGGCAAAACCCTCGTCACTCGCACGCAGGGGACCAAGATTGCTTCTGAAGGACTTAAACATCGAGTGTTTGAAGTTTCATTGGCTGATCTCCAAGGTGATGAGGACCATGCCTTTAGGAAGATTAGGTTGAGAGCTGAGGATGTGCAAGGGAAGAATGTTCTGACCAATTTCTGGGGAATGGATTTTACAACTGACAAGTTGAGGTCATTGGTGCGCAAATGGCAAACTTTAATTGAAGCTCATGTGGATGTGAAAACCACTGATAATTACACATTGAGAATGTTCTGCATTGGATTTACAAAGAGACGTGCAAACCAGGTGAAGAGGACCTGCTATGCACAATCAAGCCAGATTAGACAGATCCGCCGGAAGATGAGAGAGATCATGACTAATCAGGCTACCTCCTGTGATTTGAAAGGGTTGGTTGGCAAGTTCATTCCAGAGATGATTGGCAAAAAGATTGAAAAAGCAACATCTAGCATTTACCCTTTGCAAAATGTCTTCATTAGAAAAGTCAAGATTTTGAAAGCTCCCAAATTTGATCTCGGAAAACTGATGGAGGTTCATGGTGATTATTCAGAAGATGTTGGTGTGAAGGTAGACAGACCTGCTGATGAAACAATGGCTGAGGAGACCCAAGAGATTGTTGGAGCTTGA 789 0.436 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDVKAPSSVFELKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKGLVGKFIPEMIGKKIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEETQEIVGA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1105 262 MobiDBLite consensus disorder prediction 1 15 - -
Alju06g1105 262 Pfam Ribosomal S3Ae family 16 222 IPR001593 GO:0003735|GO:0005840|GO:0006412
Alju06g1105 262 MobiDBLite consensus disorder prediction 1 20 - -
Alju06g1105 262 Hamap 40S ribosomal protein S1 [RPS3A]. 1 259 IPR027500 GO:0003735|GO:0005840|GO:0006412
Alju06g1105 262 ProSitePatterns Ribosomal protein S3Ae signature. 62 74 IPR018281 GO:0003735|GO:0005840|GO:0006412
Alju06g1105 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 255 - -
Alju06g1105 262 SMART Ribosomal_S3Ae_2 15 222 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1105 Alju-ChrAlju06 10620571 10623003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1105 1 262 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.692 4.77e-163 450