Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1098 ATGGCGGTTGGTAAGAACAAAAGGATTTCGAAGGGCAAAAAGGGAGGCAAAAAGAAGGCAGCTGATCCCGTCGCCAAGAAGGATTGGTATGATATTAAGGCCCCTTCTGTGTTCCAAGTCAAAAATGTGGGCAAGACTCTCGTCACTCGAACTCAGGGGACCAAGGTTTCATTAGCTGATTTACAAGCTGACGAGGACCACGCGTACAGGAAGATTCGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTTACTAATTTCTGGGGAATGGATTTTACTACCGACAAGTTGAGGTCATTGGTCCGGAAATGGAAAACTTTGATCGAAGCTCATGTGGATGTAAAGACCACTGATAATTACACATTGAGAATGTTTTGCATTGAATTTACCAAGAGACGTCCAAACCAGGTGAAGAGGACCTGCTATGCACAGTCAAGCCAGATCAGACAGATCCGCCGGAAGATGAGAGAAATTATGACAAATCAAGCTACCTCATGTGATTTGAAAGAGTTGGTCCGCAAGTTCATTCCAGAAATGATTGGCAAAGAGATTGAGAAGGCAACATCCAGCATTTACCCTCTACAAAACGTGTTCATCAGAAAAGTCAAGATTTTGAAAGCTCCCAAGTTTGTTGATCTTGGAAAACTGATGGAGGTTTATGGTGATTATTCAGAAGACGTTGGTGTGAAGGTAGACAGACCCGCAGATGAAACAATGGCCGAGGCGACAACCGAAGTTGTTGAAGCTTTATTTAATGATAATGCTTCCTTAGTTTTGATTTAG 786 0.43 MAVGKNKRISKGKKGGKKKAADPVAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKVSLADLQADEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWKTLIEAHVDVKTTDNYTLRMFCIEFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFVDLGKLMEVYGDYSEDVGVKVDRPADETMAEATTEVVEALFNDNASLVLI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1098 261 MobiDBLite consensus disorder prediction 1 21 - -
Alju06g1098 261 Pfam Ribosomal S3Ae family 16 209 IPR001593 GO:0003735|GO:0005840|GO:0006412
Alju06g1098 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 247 IPR027500 GO:0003735|GO:0005840|GO:0006412
Alju06g1098 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 244 - -
Alju06g1098 261 MobiDBLite consensus disorder prediction 1 15 - -
Alju06g1098 261 SMART Ribosomal_S3Ae_2 15 209 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1098 Alju-ChrAlju06 10532875 10535103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1098 1 250 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 80.228 1.27e-145 406