Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1091 ATGGGTTTGTCGGCGATATTTGGGGGTTGCTTCAAGGCGGAGGGTCAGGCGGCGGTGCCGAAGTGCAAGGCCAAGGTGGTGGCGACGAAGCAGAGTTCGTACCACTGGGTGTCGGTGTCGGATTTGAGCAATCCGATCAGTGCGACGCTGTCGGAGGATCTGTCGGTGTCGCTCGCCGGATCCAATCTGTATGTGTTTACGTTGGCGGAGATGAAACTGATCACTCAAGGTTTCTCTTCCGGTAACTTTCTCGGAGAAGGCGGGTTCGGACCGGTTCATAAGGGGTTCATCGACGATAAGCTCCGGCTGGGTCTTAAGGCTCAGACCGTCGCCGTTAAGCTCTTGAACTTGGACGGCTCTCAGGGCCACAAGGAGTGGTTGACGGAAGTTGTTTTTCTTGGACAACTAAGACATTCACACCTTGTGAAGCTCATTGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTCTATGAATATCTTCCTAGAGGCAGCTTAGAAAATCAACTCTTCAGAAGATACTCAGTCTCATTGCCATGGTCCACAAGAATGAAAATCGCAGTTGGAGCTGCAAAGGGCCTAGCCTTCCTTCATGAAGCAGCTAAACCTGTTATATACAGAGACTTCAAAGCTTCAAACATCTTGTTAGACTCAGATTACAATGCAAAGCTATCTGATTTCGGGCTGGCGAAAGACGGACCCGAGGGAGACGACACGCACGTGTCTACCCGAGTCATGGGGACTCAGGGCTACGCGGCGCCCGAATATGTCATGACGGGTCACCTGACGTCAAAAAGCGATGTGTATAGTTTTGGAGTTGTGCTGTTAGAGCTTCTAACAGGAAGAAGATCTGTGGACAAAACAAGACCAGCAAGAGAACAAAACCTAGTAGAATGGGCCAGGCCAGTACTACACGATACCAGGAAGCTAGGAAGGATCATGGACCCTAGACTTGAAGGTCAATACTCTGAAATGGGTGCAGCCAAAGCTGCAGCATTGGCTTACCAGTGCTTGAGCCACCGTCCCAAGAACAGACCCACCATGAGCCAGGTGGTTAACACATTGGAGCCACTTCAGGACTTCGACGACGTCCCCATCGCGCCGTTCGTCTACACTGTTCCGGCCGATGACATGAACAACAACGCCGCCCGGGACTGTGGTGAGCCGCCCCGAGAGAGAAAGAATCATCACCGCCGCCACAGACACCCTCTGAGATCACCGACGTCGCCGCCGAGTCATAATAAGGCTGTGAATTCGAATAATTCACAGTCTAGGAATGGAAGCTCGGCGTCGAGTGGAAGTGGGTCCAACTCACCTACTTCACGTCACAATAAGACCAAGGCTTCTCAATAG 1353 0.5174 MGLSAIFGGCFKAEGQAAVPKCKAKVVATKQSSYHWVSVSDLSNPISATLSEDLSVSLAGSNLYVFTLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRLGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSVDKTRPAREQNLVEWARPVLHDTRKLGRIMDPRLEGQYSEMGAAKAAALAYQCLSHRPKNRPTMSQVVNTLEPLQDFDDVPIAPFVYTVPADDMNNNAARDCGEPPRERKNHHRRHRHPLRSPTSPPSHNKAVNSNNSQSRNGSSASSGSGSNSPTSRHNKTKASQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1091 450 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Alju06g1091 450 MobiDBLite consensus disorder prediction 376 450 - -
Alju06g1091 450 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Alju06g1091 450 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Alju06g1091 450 MobiDBLite consensus disorder prediction 407 450 - -
Alju06g1091 450 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1091 450 CDD STKc_IRAK 84 358 - -
Alju06g1091 450 FunFam Probable serine/threonine-protein kinase PBL8 161 371 - -
Alju06g1091 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Alju06g1091 450 PANTHER OS01G0588500 PROTEIN-RELATED 57 359 - -
Alju06g1091 450 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Alju06g1091 450 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1091 Alju-ChrAlju06 10366502 10368640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1091 66 355 Glycoside Hydrolase AT3G07070 54.266 2.87e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju06g1091 PK_Tyr_Ser-Thr 4e-47 CL0016