Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1080 ATGGAGGAAATATCTTCGGCGGTTGCAGTGCCATTTACTCTTGGGAATTTGATCCCTAAGGACTCATCAGTGACAACACACATGGATATTGCTGGATTAAAATTTATGGCAAGTACAGCAACACTGATATTAAATACTGCTATGGAGAGCTGTGAATCTGTTGGAAGTGATGAAAATCATGCAGATGCTAATCCACAAGATCAGAGTAAAGTATCTGCAGGGGAAAAAGAGAATCAAGTAGGTGCTTCGGATGTGCCAGAAATGTTCATTAAATGTAGCCGTAATTGGACCTCAGATGAAACCCATAATCAGGGAGGGAGGGAAGATGAACACAGGTCAGGGGTTGATTTACAATATCTGCATGATTCTAGGTCTCTATCTGTGGCCTGTGACAACTGCGGTATCCTTGGGGAGGAATCTTCAACTTCAGAGATCCATTTACCTAATGCCATGGAGGTTGAAAATAATGTCCATGGTATGTACAGTTTGGACGATTCATGTACTGTGCAGGACATTATTTCTGTTCCAACAGATCCTGAGAGTGAAGATGGCAATGGGTCGGATGGGTCTGATCCAAAACTAGTTGCTTCACCTCTTGAGATGCCAATGGAGAAAACAATGTGCGGAGCAAGCTTCCAGAAGGCTTTGGATTTGAATAGTAGACCTCTTTGGGGCTTTTCATCTGTTTGTGGAAGGAGACAGGAGATGGAGGATGCTGTTGCTGCAAATCCTCATCTTTTGCAAGTTCCTTCGCATATGCTAATGGATAATACTGGGAATGAAGACACTGAAAACTCAGTTGCCCACTTTTTTGCTGTCTATGATGGACATGGAGGCTGTCAGGTTGCTAATTATTGCCGGGAGTGTCTTCATTCAGTGCTTGTTGAGGAAATACATGATGCAGACTCAAGTTTGGATGGAAGTAGTTGGATGGACCATTGGGAGAAAGCATTCTCCAATTGTTTTCAGAAAGTTGATGACGAAGTAGCAGGAATTCGTGCTGAGAACAATGAAAACAATAATGATGGATCAGGATCTAGTATCAAACCACTTACTCCTGAAACTGATGGTTCTACTGCAGTGGTTGTCATTTTATGCCAAAACCACTTAATAGTTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCGCTGCCATTATCTTCTGATCACAAACCAAATAGAGAGGATGAATTGGCCAGGATAGAAGCTGCAGGAGGAAGGATCATACAATGGAATGGGTACCGGGTGCTTGGCGTCTTGGCAGTGTCAAGGTCCATAGGTGATAGGTACTTAAAGCCATGGATAATTCCTACTCCAGAAGTCAAGTTCGTCCATAGGGAGAAAAAAGATGAGTGCCTAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAACGAATCCTTCTTTGGCACAAAAAGCATGGTGATGGTGGATTGACGACAGGTACAGGGCCGCGCAAGGGAGTTGATCCTGCGGCACAGTCCGCTGCAGATTACTTATCCAGAGTTGCTCTCCAAAGGGGAAGTAAAGATAACATTTCTGTTATAGTGATAGACTTGAAGGGTAAAAGAAAATTTAAGACCAAGGCATGA 1638 0.4328 MEEISSAVAVPFTLGNLIPKDSSVTTHMDIAGLKFMASTATLILNTAMESCESVGSDENHADANPQDQSKVSAGEKENQVGASDVPEMFIKCSRNWTSDETHNQGGREDEHRSGVDLQYLHDSRSLSVACDNCGILGEESSTSEIHLPNAMEVENNVHGMYSLDDSCTVQDIISVPTDPESEDGNGSDGSDPKLVASPLEMPMEKTMCGASFQKALDLNSRPLWGFSSVCGRRQEMEDAVAANPHLLQVPSHMLMDNTGNEDTENSVAHFFAVYDGHGGCQVANYCRECLHSVLVEEIHDADSSLDGSSWMDHWEKAFSNCFQKVDDEVAGIRAENNENNNDGSGSSIKPLTPETDGSTAVVVILCQNHLIVANCGDSRAVLCRGKEALPLSSDHKPNREDELARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPTPEVKFVHREKKDECLILASDGLWDVMTNEEACEIARKRILLWHKKHGDGGLTTGTGPRKGVDPAAQSAADYLSRVALQRGSKDNISVIVIDLKGKRKFKTKA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1080 545 SUPERFAMILY PP2C-like 219 537 IPR036457 -
Alju06g1080 545 MobiDBLite consensus disorder prediction 53 84 - -
Alju06g1080 545 MobiDBLite consensus disorder prediction 174 194 - -
Alju06g1080 545 ProSitePatterns PPM-type phosphatase domain signature. 270 278 IPR000222 GO:0043169
Alju06g1080 545 Gene3D - 211 545 IPR036457 -
Alju06g1080 545 FunFam Protein phosphatase 2C 51 217 543 - -
Alju06g1080 545 ProSiteProfiles PPM-type phosphatase domain profile. 223 535 IPR001932 -
Alju06g1080 545 Pfam Protein phosphatase 2C 225 528 IPR001932 -
Alju06g1080 545 MobiDBLite consensus disorder prediction 53 76 - -
Alju06g1080 545 CDD PP2Cc 225 535 IPR001932 -
Alju06g1080 545 SMART PP2C_4 213 533 IPR001932 -
Alju06g1080 545 PANTHER PROTEIN PHOSPHATASE 175 535 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1080 Alju-ChrAlju06 10232811 10235224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1080 204 544 PP2C-type Phosphatase Gene Family AT4G26080 58.960 1.34e-136 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1080 06 10232811 10235224 Alju13g0803 13 25391272 25394098 CCT
Alju06g1080 06 10232811 10235224 Alju06g1080 06 10232811 10235224 ECH