Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1064 ATGGGAAGAAGCCCTTGTTGCTCCAAGGAGGGCTTGAACAGAGGAGCTTGGACTGTTCATGAAGACATGATCCTCAAAGACTTCATCTCCGTCCACGGCGAAGGCCGCTGGCGCAACCTCCCCAAAAGAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCCGACTCCGATGGCTAAACTACCTCAGGCCCGACATCAAAAGAGGCAATATCACCCCTGACGAAGAAGAGCTTATCGTCCGCCTTCACAAACTCTTGGGAAACAGATGGTCTTTGATTGCGGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAACACTAATTTAGGCAAGAAAGTGAAGAACCATCATCATAATCCTCATCATTACCAAAACAACAGTGTTGCTTCCTCTGCTCAACCTAAGACCCACAATGCTTTCAAGAATAGTAATAATAATCCTGTGAATCTCAAACCAAAATCAATCTCCCTACCTTCCCCGCATTCTCTCTCCAATGTCGTCCGTACGAAAGCTACCAAGTGCTCTAAGGTCGTGATCGCCCCACGTCCTCCTCCTCCTCCTCCTCCTTCTTCTAGACTACTCTTGAAGATGACCGACTCTGAAACAGAGCCGCTTCATTATCCTGTGGAAGATGTTGCCGCCGCGGCTGACTATAACCAGACGACGGGTTTACTCCGTGGCGCCGATGATAAGAGCTCGTCGAGGTTGTTGGGTGTGGGGAAGGATCATCATCATCATCATTATCAGGAGCCGTCGTCGTCGATGATTGCGGGGAATTTGCTGGCGGATTTCAGCGTGGGAGAGATCTGCTTGTGGGACCTCCTGAACTCGGATTTGTCAGAAATGTGCCACTTCAGTAACAACAACAGCGTCGACGGCCTGTCACCGTCGTCGGACCAGCAACCCTTCGTGTTCTCCGATGATGTTCTGAACGATTGGATGCAGAGCAACCACGTGGAAGACACAAATGTGGGCAATAATCTTCACTCTTTCACATCCTTCCTTGAATCCAGTGAGGAATGGCTGGCAGAGTAA 1044 0.4952 MGRSPCCSKEGLNRGAWTVHEDMILKDFISVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKNHHHNPHHYQNNSVASSAQPKTHNAFKNSNNNPVNLKPKSISLPSPHSLSNVVRTKATKCSKVVIAPRPPPPPPPSSRLLLKMTDSETEPLHYPVEDVAAAADYNQTTGLLRGADDKSSSRLLGVGKDHHHHHYQEPSSSMIAGNLLADFSVGEICLWDLLNSDLSEMCHFSNNNSVDGLSPSSDQQPFVFSDDVLNDWMQSNHVEDTNVGNNLHSFTSFLESSEEWLAE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1064 347 Gene3D - 14 66 - -
Alju06g1064 347 FunFam MYB-related transcription factor 13 66 - -
Alju06g1064 347 Gene3D - 71 144 - -
Alju06g1064 347 CDD SANT 16 61 IPR001005 -
Alju06g1064 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju06g1064 347 MobiDBLite consensus disorder prediction 125 166 - -
Alju06g1064 347 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Alju06g1064 347 MobiDBLite consensus disorder prediction 119 166 - -
Alju06g1064 347 SMART sant 13 63 IPR001005 -
Alju06g1064 347 SMART sant 66 114 IPR001005 -
Alju06g1064 347 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju06g1064 347 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju06g1064 347 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju06g1064 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju06g1064 347 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 148 - -
Alju06g1064 347 CDD SANT 71 112 IPR001005 -
Alju06g1064 347 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1064 Alju-ChrAlju06 10013916 10015175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1064 1 157 MYB Transcription Factor Family AT4G09460 59.877 9.11e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju06g1064 Myb_DNA-binding 9.1e-12 CL0123