LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g1060	ATGATGAACGGAGGAGGAGGAAGGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTGGAACATCAAGCTCTCATTTTCAAGTACATGGCCTCTGGTATTCCCATTCCTCCTGATCTCGTCTTCTCCATCAAAAGAGCCTCTCTTGACTCTCCTCTTTCCTCAAGACTCTTGTCTCTCCCTTCTCATCAACACTTTGGGTGGAACTACTTGGAGATGGGCTTGGGGAGGAAGATAGACGCAGAACCAGGGAGATGCAGAAGAACAGATGGGAAAAAATGGAGGTGCTCTAAAGAAGCTTACCCAAATTCAAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTATGAGAAAGCCTCTGCAACAGCATCAACAACAAGAAGGTTTCAAAACAACAACGTTAACCCCACCTACCAACAACAACAACACAAATTCCTTAACAGTTACAAAAAGTAACAACACTACTCCTCCTTCATTACTCTCCCTCACCACCACCACACCTCTCTCTGATACCACCACCCACAATCATCATCATTCCTTCCTCTATAATCATCATCACCAACCTTCATCAAGATCTCCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATAGTGCTTCTCATCACTTGAACAGTGGTTATGTTTATGATGGACTGAGAGATGTCGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCATGGCATCTAACGCCACTCTCAATGAGCTCATCGTCTTCTTCCTCCATGAAACAGAGGAGCAGCTACTCTGGTTTGTCCCCCACCGAGTACTCTTCTTCTTACTTGCAGCTTCAAAATCAAAACCCTAGCGAAAGTACGAACCAGCAAGGTCAAGATTGTTACCTGCTGGGATTGGGGAAACCACAAGAAGAACCTAATCAGAATCAGAAAACTGTTCATCGCTTCTTCGACGAATGGCCTAACAAAAGCAAAAACTCGTGGCTTGATCTTGACGATAAATCATCCACCACCCAGCTTTCGATTTCCATTCCCACCACCACCACGGACTCTGATCACGACCATTTTCCAGGCTTCAATTTCAGAACCCACCAAGATGTTTGA	1131	0.45	MMNGGGGRNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLDSPLSSRLLSLPSHQHFGWNYLEMGLGRKIDAEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRMRKPLQQHQQQEGFKTTTLTPPTNNNNTNSLTVTKSNNTTPPSLLSLTTTTPLSDTTTHNHHHSFLYNHHHQPSSRSPSSGFSFSLQDDSASHHLNSGYVYDGLRDVDEHAFFTEPSGTMRSFSASSMEDSSWHLTPLSMSSSSSSSMKQRSSYSGLSPTEYSSSYLQLQNQNPSESTNQQGQDCYLLGLGKPQEEPNQNQKTVHRFFDEWPNKSKNSWLDLDDKSSTTQLSISIPTTTTDSDHDHFPGFNFRTHQDV	376

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g1060	376	ProSiteProfiles	QLQ domain profile.	12	47	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Alju06g1060	376	MobiDBLite	consensus disorder prediction	184	203	-	-
	Alju06g1060	376	MobiDBLite	consensus disorder prediction	121	176	-	-
	Alju06g1060	376	Pfam	QLQ	12	45	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Alju06g1060	376	Pfam	WRC	82	122	IPR014977	-
	Alju06g1060	376	ProSiteProfiles	WRC domain profile.	81	125	IPR014977	-
	Alju06g1060	376	MobiDBLite	consensus disorder prediction	188	203	-	-
	Alju06g1060	376	PANTHER	GROWTH-REGULATING FACTOR 5	11	359	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Alju06g1060	376	SMART	QLQ_2	11	47	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Alju06g1060	376	MobiDBLite	consensus disorder prediction	252	301	-	-
	Alju06g1060	376	MobiDBLite	consensus disorder prediction	353	376	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju06g1060	Alju-ChrAlju06	9961448	9962868	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g1060	2	145	GRF Transcription Factor Family	AT3G13960	63.014	2.81e-57	190

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Alju06g1060		WRC	4e-19	No_clan