Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju06g1005 | ATGACGGAAAGTTTCTTCTGGCGACTCGCAAGTGTAGACGTGTCACCTGCACAGATTATATCATCTCTCTTGATGCTGATGATATGTCAAAGGGAAGCAACACTTTTATGTTGGGAAACTGAGCCACCTCACAAAGAGGCAAAGATTACAAAAAGCCGATCCGTTAAACACGGGAATCTAAATCAAGTTTCACCCAAGGTTTCTGCTGGTAACTATCCAGGGGCACGCATCTTATATGTGCTAGGCTCCAGGTCAAAATCAAACAGAATTGAAAACTCTGTATCTAGATCCCCGGGCAGTGATAAGGTGCTAGTGTTAAAAAGTAAGCCTCCAAGGTGGTTTGAGCAGTGCCAACGATGGTGCTTGTACTTCAAAGGAAGAGTGACAGTTGCTTTAGTTAATAACTTTCAGCTGGTGGCTTCCCCAGCAAAAGGACCTTCAGGTGAAGAACATGAGAAGATCATCCTCCAATTTGGGAAAGTAGGGAAGGATCTGCTTACCATGGATTACCAGTACCCCATCTCAGCATTTCAGGCTTTTGCAATATGCCTCAGCAGCTTTGAAACCAAAATTCTTTAG | 579 | 0.4387 | MTESFFWRLASVDVSPAQIISSLLMLMICQREATLLCWETEPPHKEAKITKSRSVKHGNLNQVSPKVSAGNYPGARILYVLGSRSKSNRIENSVSRSPGSDKVLVLKSKPPRWFEQCQRWCLYFKGRVTVALVNNFQLVASPAKGPSGEEHEKIILQFGKVGKDLLTMDYQYPISAFQAFAICLSSFETKIL | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju06g1005 | 192 | Gene3D | Tubby Protein; Chain A | 40 | 192 | IPR025659 | - | |
Alju06g1005 | 192 | PRINTS | Tubby superfamily signature | 172 | 192 | IPR000007 | - | |
Alju06g1005 | 192 | PRINTS | Tubby superfamily signature | 124 | 140 | IPR000007 | - | |
Alju06g1005 | 192 | PRINTS | Tubby superfamily signature | 151 | 170 | IPR000007 | - | |
Alju06g1005 | 192 | PRINTS | Tubby superfamily signature | 106 | 123 | IPR000007 | - | |
Alju06g1005 | 192 | Pfam | Tub family | 89 | 189 | IPR000007 | - | |
Alju06g1005 | 192 | SUPERFAMILY | Tubby C-terminal domain-like | 51 | 191 | IPR025659 | - | |
Alju06g1005 | 192 | PANTHER | TUBBY-RELATED | 81 | 191 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju06g1005 | Alju-ChrAlju06 | 9420396 | 9421306 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju06g1005 | 38 | 191 | TUB Transcription Factor Family | AT2G47900 | 44.118 | 3.34e-50 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TUB | Alju06g1005 | Tub | 5.7e-41 | CL0395 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju06g1005 | 06 | 9420396 | 9421306 | Alju06g1005 | 06 | 9420396 | 9421306 | ECH |