Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0994 ATGGGTGGGTGTTTTCCTTGTTTTGACAAGGAGGACAGTGGGGTGAAGAAGGAAGCGGTTAAGAAGGATTACCTTAAAGAAGGTTCAGCTACTCAGTCTCATCACGTCAATAGGGTTAGCTCAGACAAGCCGAAATCAAAAAGTGGCTCTGACTCTAAGAAAGAACTACCAGTTCAAAAGGATGGAACAACTGCCCACATTGCTGCACAAACTTTTACGTTTCGGGAGCTTGCAGCTGCCACAAGGAATTTCAGGCTTGAATGTTTATTAGGTGAAGGTGGTTTTGGACGTGTTTATAAAGGCCGCCTTGAAAGCACAGGGCAAGTTGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAGTTCTTGGTGGAGGTACTCATGCTTAGCCTCTTGCATCACCCAAATCTTGTGAGCTTAATCGGTTATTGTGCTGATGGAGATCAGCGGCTGCTTGTGTACGAATTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAATACGAGGATGAAAATAGCAGCTGGAGCAGCGAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCAAATATCTTGCTAGATGAGGGTTTTCATCCCAAGTTATCAGATTTTGGGCTGGCAAAACTTGGTCCAGTCGGCGATAAGACTCATGTATCAACGCGAGTAATGGGGACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGACAGCTAACTCTGAAGTCTGATGTCTACAGCTTTGGAGTTGTGTTCCTGGAACTTATTACTGGGCGCAAGGCTATCGACAATACACGTTCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTGTTTAAAGACCGGAGGAAGTTCCCCTCAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATACGAGGACTCTATCAGGCACTTGCAGTTGCAGCCATGTGTTTGCAAGAACAAGCTGCGACAAGGCCTCTTATTGGAGATGTTGTGACTGCTCTTACATACTTGGCCTCACAGACATATGATCCAAATGGGTCTGGTCATATTAGCCGAGTTGGTCCATCAACCCCTAGGAGCAAGGAGGATCGAAAGAACATAGCAGATGGCTCAGACAGCCCTGATCTTGGCCGACATCATGGATCACCGTCCACCCATAGAAATTCACCCGATTACAGGAAGAGAGATAGTAGGGATCCAAGTGCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGGGGTTCAGGAAGAAAATGGGGTTTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGCAAGTGCTGGAAGAGCTAGGGAAACTGCAAGGAACCGCGACCTGGACAGAGAACGTGCAGTTGCAGAAGCAAAAGTCTGGGGCGAAAATTGGAGAGAGAGAAAGCGGGCAAATGCAATGGGAAGCTTTGATGCTACTAATGAGTGA 1521 0.4727 MGGCFPCFDKEDSGVKKEAVKKDYLKEGSATQSHHVNRVSSDKPKSKSGSDSKKELPVQKDGTTAHIAAQTFTFRELAAATRNFRLECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRSHGEHNLVAWARPLFKDRRKFPSMADPLLQGRYPIRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGSGHISRVGPSTPRSKEDRKNIADGSDSPDLGRHHGSPSTHRNSPDYRKRDSRDPSAGTGLGRIETGGGSGRKWGLDDGERQDSQRDSPASAGRARETARNRDLDRERAVAEAKVWGENWRERKRANAMGSFDATNE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0994 506 Gene3D Transferase(Phosphotransferase) domain 1 161 371 - -
Alju06g0994 506 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Alju06g0994 506 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0994 506 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Alju06g0994 506 CDD STKc_IRAK 90 359 - -
Alju06g0994 506 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0994 506 FunFam Serine/threonine-protein kinase PBS1 161 375 - -
Alju06g0994 506 PANTHER OS07G0668900 PROTEIN 4 369 - -
Alju06g0994 506 Coils Coil 463 483 - -
Alju06g0994 506 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Alju06g0994 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Alju06g0994 506 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Alju06g0994 506 MobiDBLite consensus disorder prediction 368 477 - -
Alju06g0994 506 MobiDBLite consensus disorder prediction 26 60 - -
Alju06g0994 506 MobiDBLite consensus disorder prediction 38 60 - -
Alju06g0994 506 Pfam Protein kinase domain 88 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0994 506 MobiDBLite consensus disorder prediction 380 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0994 Alju-ChrAlju06 9332403 9337827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0994 4 387 Glycoside Hydrolase AT3G07070 62.887 1.15e-171 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju06g0994 Pkinase 1e-45 CL0016