Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0990 ATGGAATTGAATAGCCAGCGAACGACTAGGCGGCGGAGGAGGAGGCAGGAGGAGTTGGTGAGTAAAGTAATTTGGCCTTCAATTCGGGGCCATTCTTGTCCGATATGTTTCAGAAACCTCGAAGATCATTATAAAGAAGCCGCGATTCTCTCCGTGTGTATGCACGCCTACTGCATCGAATGTATTCGCAAATGGAGTGGCTTGAAAAGAAAGTGCCCTCTTTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAGCTCAGTCTTTCCTCAAGAGAGTTCCATAAAGAGAAGTTGCCCTTGGAGGCTTTTCCCAGAAATTCTCATCAAGAAATTACCTCAAGCCGTCTAGATGCTCCTAGATTTCTTCGCAGAGCAAGAGTTGCTTTAGATGAAAGGCGAAATAGGGCACTGCCATGGCGGCGATCATTCGGACGTCCTGGACATGCGAGTTCAGAAGTTATCGCTCAAAGGAAACTTGATTGGCGTGCAAGCATATACAAGAAGCAGCTGAAGGCAGTTCCTTTAACCTTTAGCTATCTTGAGCAGATTAATCCAAAAAGTAGTTTTAAAAGAGAGAAAACACTCCAAAAGATTGAGCCATGGATACGGAGGGAGCTGCAGGCTGTGCTTGGTGACCCAGATCCAACGGTCATAGTTCATGTGGCAACCTCACAGTACTTTGCATGGCTGGAAGAGAAAGTTAGTTCTGGACAGTTTGATGTTGAAGAGAGGTTTATATCACCCCTGCGTCCTTTCCTGCAAGATAAAGCCAGGATCTTTTGGCATGAACTAAGGTGTTATGCTGAGAGCTCTTACAATATTGAAACATATGATGCTGTAGTTGAATATAAAAAACTGGAGTGA 864 0.4468 MELNSQRTTRRRRRRQEELVSKVIWPSIRGHSCPICFRNLEDHYKEAAILSVCMHAYCIECIRKWSGLKRKCPLCNANFSSWFCKLSLSSREFHKEKLPLEAFPRNSHQEITSSRLDAPRFLRRARVALDERRNRALPWRRSFGRPGHASSEVIAQRKLDWRASIYKKQLKAVPLTFSYLEQINPKSSFKREKTLQKIEPWIRRELQAVLGDPDPTVIVHVATSQYFAWLEEKVSSGQFDVEERFISPLRPFLQDKARIFWHELRCYAESSYNIETYDAVVEYKKLE 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0990 287 SMART ring_2 33 75 IPR001841 -
Alju06g0990 287 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 16 285 - -
Alju06g0990 287 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Alju06g0990 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 136 IPR013083 -
Alju06g0990 287 SUPERFAMILY RING/U-box 28 82 - -
Alju06g0990 287 Pfam Ring finger domain 32 76 IPR001841 -
Alju06g0990 287 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0990 18 264 C3H Transcription Factor Family AT2G39100 48.413 1.83e-75 230