Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0980 ATGGATTCTACGAGGAACACGGGAGGTGTTGCAGGCACGGTGCTAATCCCGATGCGGTTTGTGTGGCCATATGGGGGAAGAAGTGTGTATCTCAGTGGTTCTTTTACACGGTGGTCTGAGCTTCTACCAATGTCGCCCGTCGAGGGTTGCCCAACTGTATTTCAAGTTATTTATAGCTTGACCCCTGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGAGACATGATGAGCATCAACCTCATGTACCTGGAGAATATGGGGTAGTTAACACTGTCATGTTGGCTACTGATCCTAATTTCATGCCTGTTGTAACACCGGACCCAACTGGATCAAACATGGATGTGGATAATGATGCTTTTCGGCGTGTGGTCCGCTTGACAGATGGTACATTGACAGAAGTATTGCCGAGAATATCTGATGCCGATGTCCAGATATCCCGTCAGCGCATTACTGCATTTTTGACCGTGCACACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCTTTGGACATTGATTTGCCAGTGAAACAAGCATTTCACATTTTGCATGAGCAGGGAATCCCTATGGCTCCTCTATGGGACTTCAGCAAAGGGCAGTTTGTTGGTGTTCTCAGTGCTTTGGATTTTATTTTAATTTTGAGAGAGCTTGGAAGTCATGGGTCCAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCTGCTTGGAAAGAAGGAAAATCATATCTTAGCAGACAAAACAATGGACCAGGAGCAGCATTTTCACGACGTTTTGTTAGTGCTGGGCCGTATGATAATGTAAAGGATGTTTCCTTGAAGATCCTGCAAAGTGGAGTTTCAACTGTTCCTATTATCCATTCATCTTCTGAAGATGGTTCATTTCCACAGTTATTACATCTAGCTTCGCTTTCTGGAATCCTTAAATGCATTTGCAGGTATTTTAGACATTGTGCTAATACATTGCCTATTCTTCAACTACCTATTTGTGCAATTCCAGTTGGGACATGGGTGCCCAAAATTGGGGAGTCAAACCGGCAGCCCTTGGCAATGTTGAGACCAAGTGCTTCTCTTGCTTCAGCCCTAAATTTGTTAGTCCAAGCCCAAGTAAGTTCAATACCAATAGTTGACGATAATGACTCATTGTTGGATGTATATTGCCGGAGTGACATAACAGCTTTGGCAAAGGACAGAGCTTATACACATATTAATCTTGATGAAATGACTGTTCATCAGGCCTTGCAATTGGGTCAGGATTCTTATCAGCCTTATGAACTTAGAAGTCAAAGATGTCAGATGTGCTTGCGATCTGATTCTCTCCATAAAGTGATGGAACGGCTGGCTAATCCAGGTGTCAGGCGGCTAGTCATTGTGGAAGCTGGGAGCAAACGTGTAGAAGGCATTGTTTCACTAACTGACATATTCAAGTTCTTGCTTGGTTAG 1455 0.4351 MDSTRNTGGVAGTVLIPMRFVWPYGGRSVYLSGSFTRWSELLPMSPVEGCPTVFQVIYSLTPGYHQYKFFVDGEWRHDEHQPHVPGEYGVVNTVMLATDPNFMPVVTPDPTGSNMDVDNDAFRRVVRLTDGTLTEVLPRISDADVQISRQRITAFLTVHTAYELLPESGKVVALDIDLPVKQAFHILHEQGIPMAPLWDFSKGQFVGVLSALDFILILRELGSHGSNLTEEELETHTISAWKEGKSYLSRQNNGPGAAFSRRFVSAGPYDNVKDVSLKILQSGVSTVPIIHSSSEDGSFPQLLHLASLSGILKCICRYFRHCANTLPILQLPICAIPVGTWVPKIGESNRQPLAMLRPSASLASALNLLVQAQVSSIPIVDDNDSLLDVYCRSDITALAKDRAYTHINLDEMTVHQALQLGQDSYQPYELRSQRCQMCLRSDSLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLTDIFKFLLG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0980 484 CDD E_set_AMPKbeta_like_N 17 94 - -
Alju06g0980 484 FunFam Sucrose nonfermenting 4-like protein 13 98 - -
Alju06g0980 484 Gene3D Immunoglobulins 16 106 IPR013783 -
Alju06g0980 484 ProSiteProfiles CBS domain profile. 430 484 IPR000644 -
Alju06g0980 484 Pfam Glycogen recognition site of AMP-activated protein kinase 16 98 IPR032640 -
Alju06g0980 484 SUPERFAMILY E set domains 16 97 IPR014756 -
Alju06g0980 484 ProSiteProfiles CBS domain profile. 348 405 IPR000644 -
Alju06g0980 484 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 144 482 - -
Alju06g0980 484 SUPERFAMILY CBS-domain pair 151 321 IPR046342 -
Alju06g0980 484 Gene3D - 332 484 IPR046342 -
Alju06g0980 484 ProSiteProfiles CBS domain profile. 164 226 IPR000644 -
Alju06g0980 484 SUPERFAMILY CBS-domain pair 350 483 IPR046342 -
Alju06g0980 484 SMART cbs_1 170 219 IPR000644 -
Alju06g0980 484 SMART cbs_1 434 483 IPR000644 -
Alju06g0980 484 SMART cbs_1 352 400 IPR000644 -
Alju06g0980 484 Pfam CBS domain 437 483 IPR000644 -
Alju06g0980 484 Pfam CBS domain 351 396 IPR000644 -
Alju06g0980 484 Gene3D - 141 324 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0980 Alju-ChrAlju06 9183773 9191884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0980 12 106 Protein tyrosine phosphatase (PTP) family AT3G01510 30.612 7.20e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0980 06 9183773 9191884 Alju06g0980 06 9183773 9191884 ECH