Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0978 ATGGGTTTGTTGAACGCACTGCATTTGAAACTGGCGTTGCTGGTCACCACCACGGCCGCGGCGCTGGCGCTGGCGACGGCGGAAGCTCAAACGAAGCCGGGTTGCAACTATACGTGTGGAAACGTGAGCATCCCATACCCGTTTGGCACTAGCAAGAACTGCTACATCGATGAAATGTTCTTCCTCAAGTGCACAACCACCACTTCCCCATCATCATCTGGAGAAGCTACAACACAATTGATTTACGGCAAAAATATACCAGTTCTCAACATCTCCCTGGATCCTCCTGAATTGACCATCTCCGGAGACGTCTCCAAGCATTGCTATGATTCAAACTATGATACATTTTGGAGTGCAATGTGGCTCGCTAACTTTTCTATATCAAACACCAAGAACAGATTCACTATGGTGGGCTGTGACACCATCGCTCTCATCACTGCCCTGAACGTCACGTTTAGAACTGGCTGCTTGTCGAGTTGCAGTAACGAGACGAGGTTTGAGGAAGGCGCTTGCTCTGGTGTGGGATGCTGTCAGTCCAGTTTGCCTCAAGCGATCAGGAGTAACTATAACATCACCTTACAGAGCTTTCACAACTACAGGAACGTGCGTGACTTCAATCCTTGTGGCTATGCGTTTATTGCCAAGGAAGGATCCTTCAACTTCTCACGTCAAGATCTGCTTGATCTCAGCAACAGAACACAATTTCCCGTGGTTGTGGACTGGGCTGTTTCCAATCAGACATGCGTGGAAGCCAAGAAAGATGCAAGCAGCTATGCCTGCAAGCAAAACAGCAGATGTCAAAACTCAACTGGTACTACTGGGTACTACTGCGTATGTGAAGATGGTTTCAGGGGCAATCCCTATCTCTCTAACCTCGATACCGGCTGCAAAGATATTAATGAGTGTGATGGGGACAATCGTTGCAGTAGGAGATGCCACAACGTCGATGGAAATTATAAGTGTTCTTGTCCACGAGGTTATAGAGGCGATGGCTACAAAGACGGATCAGGCTGTAAGTTCCCCATCACAGAAATTTTACTAGGCATTTCTGTAGGCTTGCTTGTTATCTTCACATTGATCTCTACATTATGCTGGGGAAACAAGCAAAGAGCACTAAAACAACTTAGAAGACAATATTTTGAGCAAAATGGAGGAAGTTATATGCTGCAGCAACTTCATCAACAAGGATACACTGATAGAACCAAGATTTTTACTGAAGATGAGCTCAAGATTGCCACAAACAACTTTGATGAAACAAGAATTCTAGGTCGTGGAGGACAAGGCACAGTTTACAAAGGCATATTACCGAATAACTCGCTTGTTGCCATTAAAAAGTCCAGAATAGGAGGTGACCCAAGACAAGTTAAGGATTTTATCAATGAAGTGACTATACTTTCTCAAATCAACCATAGGAATGTGGTTAAACTTTTTGGGTGTTGTCTTGAAACTGAAGCTCCCTTGTTGGTTTATGAGTTTGTGGATAATGGCACTCTTCTTGACCATATAGACCCACTAAAGAATGAGCACTCTCTTTCGTGGGAGACTCGACTAAGGATAGCTGCAGAAACAGCTGAGGCCATTTCATATTTACACTCTGCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTGCCAACATATTATTAGATCATAGTCATCAAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCACTTGATGAAACTCAAATTACCACCGTGGTTCAAGGGACACTGGGATATTTGGATCCAGAGTACCTCCTTACGGGTCAACTTAACGAGAAAAGTGATGTTTATAGCTTTGGAGTTGTACTTGTGGAGCTAGTCACCGGAAATAAAGCGGTTGAATTCAATAGGCCAGAACAAAGAAATTTGGCCATGTACTTTGCATCTTCAATGAAAGATGACAACTTATGGCAGATTCTTGACAAGCGAGTATTGGACCAGAAGAATGCAGAGCAGTTAAAGGAGGTTGCTTTCTTAGCAAGGAGGTGCGTTAGAGTTAATGGAGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAGGGTTTGATTGCTATGAAAAAGCATCCTTGGGGGAAGGGAGAGGACATGATGTCTGAAGAATGTGAATACTTGCTTAGTCATGTAGTTGATGGATATGGGAATGCTAGTGCGAGCACTTCAGCTGCCTATGATAGCATACAGAAACAGTTAGCATTTGAGATTGAAGATGGGCGATAA 2238 0.4361 MGLLNALHLKLALLVTTTAAALALATAEAQTKPGCNYTCGNVSIPYPFGTSKNCYIDEMFFLKCTTTTSPSSSGEATTQLIYGKNIPVLNISLDPPELTISGDVSKHCYDSNYDTFWSAMWLANFSISNTKNRFTMVGCDTIALITALNVTFRTGCLSSCSNETRFEEGACSGVGCCQSSLPQAIRSNYNITLQSFHNYRNVRDFNPCGYAFIAKEGSFNFSRQDLLDLSNRTQFPVVVDWAVSNQTCVEAKKDASSYACKQNSRCQNSTGTTGYYCVCEDGFRGNPYLSNLDTGCKDINECDGDNRCSRRCHNVDGNYKCSCPRGYRGDGYKDGSGCKFPITEILLGISVGLLVIFTLISTLCWGNKQRALKQLRRQYFEQNGGSYMLQQLHQQGYTDRTKIFTEDELKIATNNFDETRILGRGGQGTVYKGILPNNSLVAIKKSRIGGDPRQVKDFINEVTILSQINHRNVVKLFGCCLETEAPLLVYEFVDNGTLLDHIDPLKNEHSLSWETRLRIAAETAEAISYLHSAASIPIIHRDIKSANILLDHSHQAKVSDFGASRLVPLDETQITTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELVTGNKAVEFNRPEQRNLAMYFASSMKDDNLWQILDKRVLDQKNAEQLKEVAFLARRCVRVNGEERPTMKEVATELEGLIAMKKHPWGKGEDMMSEECEYLLSHVVDGYGNASASTSAAYDSIQKQLAFEIEDGR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0978 745 ProSitePatterns Calcium-binding EGF-like domain signature. 298 321 IPR018097 GO:0005509
Alju06g0978 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 689 IPR045274 GO:0007166
Alju06g0978 745 Pfam Protein kinase domain 417 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0978 745 Gene3D Transferase(Phosphotransferase) domain 1 493 706 - -
Alju06g0978 745 SMART egf_5 247 297 IPR000742 -
Alju06g0978 745 SMART egf_5 301 339 IPR000742 -
Alju06g0978 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Alju06g0978 745 ProSiteProfiles EGF-like domain profile. 298 330 IPR000742 -
Alju06g0978 745 CDD STKc_IRAK 422 689 - -
Alju06g0978 745 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Alju06g0978 745 FunFam Wall-associated receptor kinase 2 387 492 - -
Alju06g0978 745 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
Alju06g0978 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Alju06g0978 745 Gene3D Laminin 301 340 - -
Alju06g0978 745 Pfam Calcium-binding EGF domain 259 285 IPR001881 GO:0005509
Alju06g0978 745 Pfam Calcium-binding EGF domain 298 331 IPR001881 GO:0005509
Alju06g0978 745 FunFam Fibrillin 2 293 334 - -
Alju06g0978 745 SMART egfca_6 252 297 IPR001881 GO:0005509
Alju06g0978 745 SMART egfca_6 298 339 IPR001881 GO:0005509
Alju06g0978 745 Gene3D Phosphorylase Kinase; domain 1 388 492 - -
Alju06g0978 745 SMART serkin_6 416 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0978 745 SUPERFAMILY EGF/Laminin 298 331 - -
Alju06g0978 745 FunFam Wall-associated receptor kinase 2 493 709 - -
Alju06g0978 745 ProSiteProfiles Protein kinase domain profile. 416 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0978 745 CDD EGF_CA 298 330 - -
Alju06g0978 745 Gene3D Laminin 253 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0978 Alju-ChrAlju06 9154587 9157875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0978 27 745 Receptor kinase-like Gene Family AT1G21230 46.765 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Alju06g0978 Pkinase 1.1e-48 CL0016