Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0964 ATGGAGGACAACAACAACCTGGGAGGATCAGGCAGTTCCTCATCATCAATCAGTGGAGGGATAATGATAAAGGAACAAGACAGGTTGTTGCCGATGGCGAATGTCGGTCGGATTATGAAGCAAAGTTTGCCGCAGAACGCGAAGATCTCGAAGGAAGCGAAGGAGACTATGCAAGAATGCGTGTCGGAGTTCATAAGCTTCGTCACCGGCGAGGCCTCCGATAAGTGCAAAAAGGAGAGAAGAAAGACCGTTAATGGCGACGACATATGTTGGGCCTTGAAAACCCTAGGCTTTGATGATTACGCAGAGCCACTTCAAAGGTACTTGCATAGATATAGAGAGCTTGAAGTAGATCAACGAGCTAATAATAATTCCAGTCATCATCAAGATACAGATCATTAA 402 0.4552 MEDNNNLGGSGSSSSSISGGIMIKEQDRLLPMANVGRIMKQSLPQNAKISKEAKETMQECVSEFISFVTGEASDKCKKERRKTVNGDDICWALKTLGFDDYAEPLQRYLHRYRELEVDQRANNNSSHHQDTDH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0964 133 FunFam Nuclear transcription factor Y subunit B-3 18 133 - -
Alju06g0964 133 SUPERFAMILY Histone-fold 26 131 IPR009072 GO:0046982
Alju06g0964 133 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Alju06g0964 133 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Alju06g0964 133 Gene3D Histone, subunit A 22 133 IPR009072 GO:0046982
Alju06g0964 133 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Alju06g0964 133 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Alju06g0964 133 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Alju06g0964 133 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 19 125 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0964 Alju-ChrAlju06 8992969 8993370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0964 21 116 CCAAT-HAP3 Transcription Factor Family AT2G47810 82.292 6.11e-58 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju06g0964 CBFD_NFYB_HMF 6.4e-28 CL0012