Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0961 ATGAAGCTCATGATTAATTCCAAACGCCTCAAAGCTCTTCCGTGGCTAAACGGTATTCTCAGGACATCTCCGACCTCACAATGCTTTCGAATCTTGCAACACAACCCTTCATCCATATTCTCTCTCACATTCAGCACAATCGCTTCTTCAGGTAATCACTCGTTTACTGTATCATACCTCGTTAACAATTTAGGGTTCTCCCAAGAAGTCGCTTTAAAGGTCTCCAAGACCGTTCGATTTGAGACCGCACAAAAGCCAGAAGCAGCTTTCAGCTTCTTCAGATGTCGCGGTTTCTCTAAGTCTCAAACCAACGATCTTGTTGAAAGGTTACCGATGCTTCTTTTGTGCAATCCCCATAGACGTATTTTGCCCAAGTTTGAATTTCTCCTCTCAAAAGGGGCTTCTACCACTGACATAGTCTCCATGGTGTATAAGAATCCGAGATTCTTACTAAGAAGCTTGGAGAAACACATAATCCCATCCTATGGATTTTTCAAAGGCTTTTTTAAAAGCGACAAGGCAACAATCGATTGTATAAAACGCTGTCCTTATATACTTGCGGACACTCGGGTGATTCTAACTATCAACTTGTTGCTAAAGAATGGAGTATCAGGGGCAAATATTGCTCTCATACTATGTAGGAGGCCTCGTGGACTGCAGCTGTCAAGTGAAATTATGAAGTTGGCTGACGAAGTTAAAGCTATGGGGTTTAATCATCGGAAAATACAATTCGGTATAGCAATGATGGCCAAAATGAACATAAGCAAGTCCCTGTGGGAAGCCAAAGTTGATATCTTCAGGACCTGGGGGTGGTCGGAGGAAGCATGGTTGAGAGCATTCAGGACGCAACCGCATTGTATGTTAGCATCGAAGGATAAAATCAACGCGGTGATGAGTTTCTGGGTTAACCAGTTAGGTTGGAGTTCTTTGTTCCTTGTTGAAGATCCAAGACTCTTTGGATATAGCTTGAATAAAAGGATTGTACCCAGGGGTTTGGTTCTGCGGTATCTTCACTCAAAAGGTTTAATAAGCAAGAATTCTTCCTTAACCTTTCCATTTGTTATTCCCGAAAAGCAGTTCCTTGAAAGATTCGTGAATTGTTTTGAGGAGCATGATGATCAGATATTGAAGCTCTATGAAGAAAATTTGAAGGATGATGGCATGTCATCTGCCTGA 1176 0.4192 MKLMINSKRLKALPWLNGILRTSPTSQCFRILQHNPSSIFSLTFSTIASSGNHSFTVSYLVNNLGFSQEVALKVSKTVRFETAQKPEAAFSFFRCRGFSKSQTNDLVERLPMLLLCNPHRRILPKFEFLLSKGASTTDIVSMVYKNPRFLLRSLEKHIIPSYGFFKGFFKSDKATIDCIKRCPYILADTRVILTINLLLKNGVSGANIALILCRRPRGLQLSSEIMKLADEVKAMGFNHRKIQFGIAMMAKMNISKSLWEAKVDIFRTWGWSEEAWLRAFRTQPHCMLASKDKINAVMSFWVNQLGWSSLFLVEDPRLFGYSLNKRIVPRGLVLRYLHSKGLISKNSSLTFPFVIPEKQFLERFVNCFEEHDDQILKLYEENLKDDGMSSA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0961 391 Gene3D Transcription termination factor 3, mitochondrial 190 377 IPR038538 -
Alju06g0961 391 Gene3D Transcription termination factor 3, mitochondrial 52 189 IPR038538 -
Alju06g0961 391 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 SMART mt_12 209 238 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 SMART mt_12 176 204 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 Pfam mTERF 191 360 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 Pfam mTERF 91 186 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 PANTHER CGI-12 PROTEIN-RELATED 53 368 IPR003690 GO:0003690|GO:0006355
Alju06g0961 391 FunFam Mitochondrial transcription termination factor-like 154 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0961 Alju-ChrAlju06 8968842 8970017 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju06g0961 mTERF 9.7e-18 No_clan