Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0959 ATGTTTAATTCCCAGCGCCTCAGGGCCCTTCTTATAAGAACATCACCAACCGTACGATGCGTTCGTCTCTTGCAAGAACACTACCCTTCGCCCACATTCTCTCTTAAATACAGCACAAGTGCTTCTCCAGGTGATCACTCGTTTACTGTATCATACCTCATTAACAGTTTAGGGTTTTCCCTAGAAGCTGCTTTAAATGCTTCCAAGAAAGTTCGATTTGACACCTCACAAAAGCCAGATTCAGTTGTGAGCTTCTTCGAAAGCCACGGTTTCTCTAAGTCTATCATAAAAGATGTCATCAGAAAGGATCCATGGCTTCTTTTGTGCCATCCCCAACATAATATTTTGCCCAAGTTTGATTTTTTCCTCTCAAAAGGTGCAACGACCTCCGACCTTAACTTCATGGTGCGAAGGACCCCTAGATTCCTGTTGAGAAGCTTAGAGAATCATATAATCCCATCATATGAAATGATAAAAGGGTTTCTTCAGAATGATAAAACCACCATTTCAAGTATAAAAGGCTATCCAGATATGCTTTATGACTCTCGAGCAATACAAAGTATTAACTTGTTGCTAGAGAATGGAGTGTCAAGGACGAACGTTGCTCTCATACTCAGAAGGAGGCCTCGTACACTGAACTCCCCTAATGTCCTTACAAAGGTGGTAGAGGAAGTTAAGTGTTTGGGATTTAATCCTTTCAATACAACATTTAGTGTTGCATTGATAGCTAAAACGCTTTTGAGCAAGTCCCTCTGGGACGCCAAAGTTGATCTCTTCAAGAGATGGGGATGGTCAGAAGAAACACTGTTAGAAGCATTTAGGAAGCAACCACACTGTATGTTAGCATCAAGGGATAAGATTAATGCGGTGATGAGTTTTTGGGTTAACCAGTTAGGTTGGAATTCTTTGCTCCTTGTCAAGGGACCGAATATGTTTCTATACAGCTTTGAGAGAAGGATTATCCCAAGGGCTTCAGTTTTACATTATCTTCAGTCAAAAGGGTTGATAAAAAAGAATGCTAGCTTAGTTATGCCATTTAATTTGACTGAAAGGCAGTTCCTGGAAAGATTTGTGGAATGTTTTGAGGAGCATAATCATCGTCTATTGAAGCTATATGAAGAAAAATTGAAGAATGATGGAATGTCATGTGCTTGA 1155 0.4017 MFNSQRLRALLIRTSPTVRCVRLLQEHYPSPTFSLKYSTSASPGDHSFTVSYLINSLGFSLEAALNASKKVRFDTSQKPDSVVSFFESHGFSKSIIKDVIRKDPWLLLCHPQHNILPKFDFFLSKGATTSDLNFMVRRTPRFLLRSLENHIIPSYEMIKGFLQNDKTTISSIKGYPDMLYDSRAIQSINLLLENGVSRTNVALILRRRPRTLNSPNVLTKVVEEVKCLGFNPFNTTFSVALIAKTLLSKSLWDAKVDLFKRWGWSEETLLEAFRKQPHCMLASRDKINAVMSFWVNQLGWNSLLLVKGPNMFLYSFERRIIPRASVLHYLQSKGLIKKNASLVMPFNLTERQFLERFVECFEEHNHRLLKLYEEKLKNDGMSCA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0959 384 FunFam Mitochondrial transcription termination factor-like 147 365 - -
Alju06g0959 384 PANTHER CGI-12 PROTEIN-RELATED 46 360 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 SMART mt_12 202 231 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 Pfam mTERF 184 353 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 Pfam mTERF 83 231 IPR003690 GO:0003690|GO:0006355
Alju06g0959 384 Gene3D Transcription termination factor 3, mitochondrial 172 371 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0959 Alju-ChrAlju06 8962131 8963285 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju06g0959 mTERF 3.2e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0959 06 8962131 8963285 Alju06g0959 06 8962131 8963285 ECH