Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0958 ATGTATAATTTCCAACGCTTCAAATCCCTTCTATGCCTGAACTGTACTGTTAGAAAATCACCAACCTTACCATGCTTTCGTCTTTCGCAACACTACCCATTACCAGCATTCTCTCTCAAATTCAGCACAATTGTTTCACCAGGTGATCACTCGTTTACTGTATCATACCTCGTTAACAATATAGGGTTTTCACAAGAAGCTGCTTTAAATGCTTCCAAGAGAGTTCGATTTGACACCTCACAAAAGCCAGATTCAGTTGTCAGCTTCTTTGAAAGCCATGGTTTCTCTAAGTCTATGATAAAAGATGTCTTTAAAAAGAATCCATGGCTTCTTAATTGCAATCCCCAAAATAGGATTTTACCCAAGTTTGAATTTCTCCTCTCGAAAGGTGCTTCTACCTCCGACATTGTCCTCATGGTGCATACGAGCGCGAGATTCCTGGAAAGAAGCTTGGCGAATCACATAATCCCATCATATGAATTGTTAAAAGGGTTTCTTCAAAATGATAAAACCACCATTTACTGTATAAAACGTTACCCAGATATGCTCTATGGTTCTCGAGTGATACAAGGCATTAACATGTTGTTTAAGAATGGAGTGTCAGGGGCGAACATTGCTATAATGCTACATGACAGGCCTTATATACTAAACTTTCCAAATGAACTTGAAGCAGCGATTGAGGAACTTAAGAGTTTGGGGTTTAATCCTTCTACCACACCTTTCAGCGCAGCATTGATGGCCAAAGTGGGTTTAAGCAAGTCCCAATGGGAAGCCAAGGTTGAAGTCTATAAGAAGTGGGGATGGTCAGAAGAAGCATTATTGAAAGCATTTAGGACGTATCCCCGTTGTATGTTAGCAGCCAAGGATAAAATTAATGCGGTGATGAGTTTTTGGGTTAACCAGTTGGGTTGGAGTTCTTTGCTCCTTCTCAAAAAACCAACAATATTTGGATTTAGCTTGAAGAAAAGGATTATTCCTAGGGCTTATGTTCTCCAGTTTCTTTATTCAGAAGGTTTGATGAAAAAGAATGCTAGCTTGTTCATGCCATTTATTGTTCCTGAAAAGCAGTTCCTGGGAAGATATGTGAAATGTTTTAAGGAGCATGATCATCAGCTAATAAAGCTGTATGAAGAAAATATGAAGAATGGTGGCATGTCATGTTCATGA 1167 0.3907 MYNFQRFKSLLCLNCTVRKSPTLPCFRLSQHYPLPAFSLKFSTIVSPGDHSFTVSYLVNNIGFSQEAALNASKRVRFDTSQKPDSVVSFFESHGFSKSMIKDVFKKNPWLLNCNPQNRILPKFEFLLSKGASTSDIVLMVHTSARFLERSLANHIIPSYELLKGFLQNDKTTIYCIKRYPDMLYGSRVIQGINMLFKNGVSGANIAIMLHDRPYILNFPNELEAAIEELKSLGFNPSTTPFSAALMAKVGLSKSQWEAKVEVYKKWGWSEEALLKAFRTYPRCMLAAKDKINAVMSFWVNQLGWSSLLLLKKPTIFGFSLKKRIIPRAYVLQFLYSEGLMKKNASLFMPFIVPEKQFLGRYVKCFKEHDHQLIKLYEENMKNGGMSCS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0958 388 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 SMART mt_12 206 235 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 FunFam Mitochondrial transcription termination factor-like 151 368 - -
Alju06g0958 388 Gene3D Transcription termination factor 3, mitochondrial 186 373 IPR038538 -
Alju06g0958 388 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 Pfam mTERF 87 190 IPR003690 GO:0003690|GO:0006355
Alju06g0958 388 Pfam mTERF 189 357 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0958 Alju-ChrAlju06 8954700 8955866 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju06g0958 mTERF 6.6e-17 No_clan