LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g0950	ATGGAGTATTTGGTCAAGCCGCTGTTTAATTATCTGCTCTCTCACTGGATTGTTCCGAATCTTCTGGAGAAAAACATGGCTAGTTCTGAAGGAGAACTCGAAATAAGTTTTGGCTATCAATGCAATAGTAATAGAGTTTCCTCTTCTAAGTTAATTGATAACTATAAAATCCTACCTTCACTCCGTAAAACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCCACATTAGCCAACACTGGCATCTGCGATGGTCTTATAGGAGAAGAAATTCTTCCAAACTTGGACTCCCCTAATATGTTTCGGAAGGTTCTCTCTTTTTCAAGCCTTTCAAGGTTGGATATGTTGTCATCTTCTCTCCAAAGCACTTTGTCAAATTTAAGTTGCAGTCCCTCCACCTCGAGTAATATGCTTGAACACGACTCTTCCACAATGGCTCCTTCACGAAGTGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATCGAGTTCAAGCGGTTTGTTCTGAAGAAAATGGGTGGCTTTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTGGCTGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATCCTGAATTGGAGACAGATTCTGTCAGTACTTCAGGTTTGGATGGATCAGTCCAACATAAGTTGGATGATAGCCTTCATAATTGTGACAAACAATCATTTTCGGATGGGGTACTTGATTGCCTGCAGCATGCTCTTAGTCAGGTTGAGAATGATTTCTTGCATATGGTTGAGCAAGAAAAAGAGGATCGCCCGGACCTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTATACACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGAGCATTTGTGAATCAAATGGGGCTGGAAAACTCAAAGCTATCCAGCTCACAGATAGTCACACTGTTGCAAATGAAGCTGAAAGAGCTCGGCTTCTGGCTGATCATCCTGATGATCCTATGACCATTACATCAGGAAGAGTAAAAGGAAAATTGAAGGTTACTCGCGCAGTTGGAGTTGGCTATTTGAAAAAGAAAAGTCTGAATGATGCACTGATGGGGATCCTTCGGGTTCGCGATCTTGTAAGCCCTCCATATATTTCCGCGGAACCATCATTAGGTGTGCATAAGATCTCAAGTTCTGATTGTTTCGTCGTAGTGGGCAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCAGTGGAGCTTGTAGAGTCTTATATCCAGAGCAATCCTTGTGGTGATCCTGCAAAGTTTCTCGTCGAGCAGCTTGTCTCAAGAGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACAGTAATAGTGATCATCCTGGGCACTAATCAGCGGACTTTAAAGGCATCAACTTGTATATGA	1533	0.4214	MEYLVKPLFNYLLSHWIVPNLLEKNMASSEGELEISFGYQCNSNRVSSSKLIDNYKILPSLRKTSSFSCLSGAALSANATLANTGICDGLIGEEILPNLDSPNMFRKVLSFSSLSRLDMLSSSLQSTLSNLSCSPSTSSNMLEHDSSTMAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYPELETDSVSTSGLDGSVQHKLDDSLHNCDKQSFSDGVLDCLQHALSQVENDFLHMVEQEKEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSICESNGAGKLKAIQLTDSHTVANEAERARLLADHPDDPMTITSGRVKGKLKVTRAVGVGYLKKKSLNDALMGILRVRDLVSPPYISAEPSLGVHKISSSDCFVVVGSDGLFDFFNNDEAVELVESYIQSNPCGDPAKFLVEQLVSRAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNQRTLKASTCI	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g0950	510	Gene3D	-	127	505	IPR036457	-
	Alju06g0950	510	SUPERFAMILY	PP2C-like	170	498	IPR036457	-
	Alju06g0950	510	Pfam	Protein phosphatase 2C	237	451	IPR001932	-
	Alju06g0950	510	SMART	PP2C_4	151	495	IPR001932	-
	Alju06g0950	510	CDD	PP2Cc	170	497	IPR001932	-
	Alju06g0950	510	ProSiteProfiles	PPM-type phosphatase domain profile.	157	497	IPR001932	-
	Alju06g0950	510	PANTHER	PROTEIN PHOSPHATASE 2C	149	495	IPR015655	GO:0004722\|GO:0006470

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju06g0950	Alju-ChrAlju06	8841851	8845080	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g0950	31	510	PP2C-type Phosphatase Gene Family	AT3G16560	62.475	0.0	574