Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0920 ATGGCCACCGATGACAAGCCCAATCTCAATCCCTTCGACACCAATAATGGCTATGCATTCACCACCAACACCCTCCTCACTATCACCTTCGTCTTGTTCTTCCTCATCATCCTCCTCATTTCCCTCCACTTCTACGCCCGCTGGTGCCTCCGCCGTGCTCGCCGCCAGCGCCGCCGTTCATACCTCGTCTTCTACGTCGACTCCGATGCCACCCCACCCATCGGTCTCGACCCCTCTGTGATTCAGTCTCTCCCTATCTTCGTTTATTCCGCCCACTCCGACCCCGCGGAATGCGCCGTGTGCTTGTCCGATTTCGAAGAGAACGAATCGGGTCGGGTTTTGCCCAAATGCAACCACACTTTCCACGTCGAATGCATCGACATGTGGTTCCAGTCCCACTCAACTTGCCCGCTCTGTAGATCTTTGGTTGAGCCCGTCGTCCCGCCCGGGGACCGACCCGGGCCGGAAGTGGTGATCGATGTGTGCGAGCCGGGTTCGAGTTCAGGGTGTCATCAGGCTGGAGAAAAAGAGAACCGAAGTGGCCGGACGCTCTGTTCTCCGTCGTCTTCAATTGCGTTGAGGCGGAAGCCGTCGTCCGTGGGTGTGGCAATTGACGTGCCGTTGAACAGAAGCTTCGGGAGAGAGGCGGAGGGGTCGACGGCGACGTTCAGGTCACCGGGGAGTCGTTTGCTATCGTTCAAGAGAATACTGAGCAGAGACCGGAAGTCAAGTCCTTCATCCCCATCGTCGGAAAACTGTGCCGTTGGATGCAGCTCCGTCTGTGACCGAGATAGAGACGAGTCAATGAGTTGA 813 0.5732 MATDDKPNLNPFDTNNGYAFTTNTLLTITFVLFFLIILLISLHFYARWCLRRARRQRRRSYLVFYVDSDATPPIGLDPSVIQSLPIFVYSAHSDPAECAVCLSDFEENESGRVLPKCNHTFHVECIDMWFQSHSTCPLCRSLVEPVVPPGDRPGPEVVIDVCEPGSSSGCHQAGEKENRSGRTLCSPSSSIALRRKPSSVGVAIDVPLNRSFGREAEGSTATFRSPGSRLLSFKRILSRDRKSSPSSPSSENCAVGCSSVCDRDRDESMS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0920 270 Pfam Ring finger domain 97 140 IPR001841 -
Alju06g0920 270 MobiDBLite consensus disorder prediction 242 256 - -
Alju06g0920 270 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Alju06g0920 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 145 IPR013083 -
Alju06g0920 270 CDD RING-H2_EL5-like 97 140 - -
Alju06g0920 270 SUPERFAMILY RING/U-box 93 146 - -
Alju06g0920 270 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 145 - -
Alju06g0920 270 FunFam RING-H2 finger protein ATL3 67 145 - -
Alju06g0920 270 MobiDBLite consensus disorder prediction 235 270 - -
Alju06g0920 270 SMART ring_2 98 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0920 Alju-ChrAlju06 8572843 8573655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0920 6 246 Rapid Response to Elicitors AT3G16720 43.956 1.46e-57 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0920 06 8572843 8573655 Alju06g0920 06 8572843 8573655 ECH