Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0918 ATGAAGAATATAGCTGTTATTTTTGTATTTGGGATGGCCATGGTGGCTGCCAATGCAGTTGCCTCCGCAGAGGAACATGGTGAGAAGAAACAGATTCTGTTGCCTCAAATGGGCGCGGAAATGCTCTGTAGTTCAGCCCAATACAAAGAAACCTGCGAACACAGCCTCTCAAAAGCAAATAATGGCACCACGGACGGTAAAGAACTCGTGAAAACCGCCTTTGACGCGGCCGCCAAGGAGTTCAAGAAGTTCATTGACAACTCCACTCTCTTCGAGGAGCTTGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCAAAGAGGTGCTAGACTACGCCATTGACGACATTCAAAACTCAATCAATAGGGTGGACCAGTTCGACATTGGTATGCTTGATGAATATGTCTATGACGTTAAGGTATGGCTCGGAGGCACTATCACCCACCAACAAACTTGCTTGGACGGCTTTGAAAACACCACCACTGACGCGGCCGAGACCATGGCCAAGGTGTTGAACACCTCCCTCGAGCTTAGCATGAACGCTTTGGACATTATTTCTGGCCTCTCCGACATCGCCGAAGCGTTCAAATTACCTGGCTTCGCAAACATCCTGCAAACTTTTGGCGATAGCAACACCTCCGGTCAGCAAGCTCATGGCAATGACAATACCTCCAGTAAGCAAACTCATGCTAATCACAATAGCTTGCATCGGAAGCTTCTCGAGAGCTTGCCGTCGTGGGTAAGTGATAACCAACACCGTCACCTCCTGGCTACAGCCGCAGCCGGAGCCGCCAACGTTAAACACGATATTGTTGTGGCTCAAGATGGAACTGGACAGTTCACAACACTCACCGATGCTCTTAAAACTGTTCCAAAGAATAATACAAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAATGAGATTGTGAATATCACCAAGCAATCTAGTTACATCACTATCATCGGAGATGGTCCCACCCACACCAGATTCACCGGCAATCTTAGCTATGCCGATGGCGTCCAAACTTACAACACCGCAACATTTGGTGTGAATGCTCCTTACTTCACAGCCATGCATATAGGGATTGAGAACTCAGCCGGAGCAATTAAGCGCGAAGCTGTGGCGCTCCGAGTAACAGCAGATAAAGCCATCTTCTACAATTGCCAAATTGACGGACACCAAGACACACTTTACGCCCAGTCCCACCGCCAGTTCTACCGGGACTGCGTTATCTCCGGCACAATCGACTTCATCTTCGGCGACGCGGCCATGGTCTTCCAGAATTGCACTTTGGTCGTAAGGCAACCTTTAAGCAACCAGAACTCCATCGTCTCTGCGAGTGGCCGCAACGCGAACAACAACCCTAGCGCCATGGTGTTCCAGAGCTGCCGCTTCACCGCCGACCAGCTCTACCTCTCCGACCCAGCAAAGAAACCGGCATACCTCGGACGGCCATGGAGGGCCTACGCCAAGGTGATTATATTGGATTCTCATATCGACGGCATCTTCGCTCCTGAAGGTTATACTTCATGGATGGGTAGCAACTATCACACAACCTGCATCTTCAATGAGTACAACAACAAAGGTGCCGGCGCCGATACCTCTCACAGAGTGAAATGGCCTGGCGTGAAGGTGATCACTGCTGTTGAAGCTGCAAATTTCTATCCTGGCAAGTTCTATGAATTCAGGAATGCAACTAACTCTGAAGATGATTCATGGATCTCTGCCTCTGGGATTCCTTACTCCGCTGGCCCCATGGCCGTACCAAATTGA 1785 0.4952 MKNIAVIFVFGMAMVAANAVASAEEHGEKKQILLPQMGAEMLCSSAQYKETCEHSLSKANNGTTDGKELVKTAFDAAAKEFKKFIDNSTLFEELAKDNMTKQAMEICKEVLDYAIDDIQNSINRVDQFDIGMLDEYVYDVKVWLGGTITHQQTCLDGFENTTTDAAETMAKVLNTSLELSMNALDIISGLSDIAEAFKLPGFANILQTFGDSNTSGQQAHGNDNTSSKQTHANHNSLHRKLLESLPSWVSDNQHRHLLATAAAGAANVKHDIVVAQDGTGQFTTLTDALKTVPKNNTKPYVIYVKAGIYNEIVNITKQSSYITIIGDGPTHTRFTGNLSYADGVQTYNTATFGVNAPYFTAMHIGIENSAGAIKREAVALRVTADKAIFYNCQIDGHQDTLYAQSHRQFYRDCVISGTIDFIFGDAAMVFQNCTLVVRQPLSNQNSIVSASGRNANNNPSAMVFQSCRFTADQLYLSDPAKKPAYLGRPWRAYAKVIILDSHIDGIFAPEGYTSWMGSNYHTTCIFNEYNNKGAGADTSHRVKWPGVKVITAVEAANFYPGKFYEFRNATNSEDDSWISASGIPYSAGPMAVPN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0918 594 CDD PMEI-like_3 42 191 - -
Alju06g0918 594 Gene3D - 268 590 IPR012334 -
Alju06g0918 594 PANTHER PECTINESTERASE 15 579 - -
Alju06g0918 594 ProSitePatterns Pectinesterase signature 2. 415 424 IPR033131 -
Alju06g0918 594 SMART PMEI_2 34 186 IPR006501 GO:0004857
Alju06g0918 594 Pfam Pectinesterase 271 563 IPR000070 GO:0030599|GO:0042545
Alju06g0918 594 MobiDBLite consensus disorder prediction 213 232 - -
Alju06g0918 594 FunFam Pectinesterase 37 191 - -
Alju06g0918 594 NCBIfam pectinesterase inhibitor domain 40 190 IPR006501 GO:0004857
Alju06g0918 594 SUPERFAMILY Pectin lyase-like 268 587 IPR011050 -
Alju06g0918 594 Pfam Plant invertase/pectin methylesterase inhibitor 42 186 IPR006501 GO:0004857
Alju06g0918 594 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 190 IPR035513 -
Alju06g0918 594 FunFam Pectinesterase 4 268 589 - -
Alju06g0918 594 MobiDBLite consensus disorder prediction 213 235 - -
Alju06g0918 594 ProSitePatterns Pectinesterase signature 1. 296 315 IPR018040 -
Alju06g0918 594 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0918 Alju-ChrAlju06 8545791 8547929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0918 42 591 Carbohydrate Esterase AT3G05610 41.818 7.42e-161 473