Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0917 ATGGGTAACGGTGAGCATGAAAGAAAGAAGAAGATGGCTGTTATTTCGGTATCCGGGATCCTCCTAGTGGCCATGGTGGCCGCCGTAGGCGTCGGTCTATCCGGTGCCGGGGGCGGCGCAGCAGCGGAGGATCACAGTGAGAAGAAGCAGATCTCACAAAAGAACGTGGAAATGCTCTGCAGTTCAGCTCAATACAAAGAAACCTGCGAACACAGCCTCTCAAAAGCAAACAAGAATGGTACCACGGACATTAAAGAACTCATCAAAACCGCCTTCCACGCCGCGGCCAAGGAGTTCAAGAAGTTAATCAACAACTCCACCCTCTTCGAGGAGCTCGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTGCTAGACTACGCCATTGACGACGTGAGACACTCGATCGACAGCGTGGAACAATTTGATATAAGTAAGATCGGTCAATACGCCTATGACGTTAAGGTGTGGCTCGGAGGCACTATCTCCCATCAACAAACCTGCTTGGACGGCTTCGAGAACACCACTACTCACGCCGCCGAGACCATGGCCAAGGTGTTGAACACCTCCCTCGAGCTGAGCATGAACGCGTTGGACATTATTTCTGGCCTCTCTGACGTCGCCGATGTCTTCGGATTCGCCACCAGCTTCGGCAGCGCAACGCAAGATAATGGCATTGTCAACACCACCAACGAGCAAGCTCAACACGGCAATGAAAACACCTCCAGTCGGAAGCTTCTCCAGAGTTTGCCGTCGTGGGTAAGTGATAGCCACCACCGTCACCATCTGGCCAGAGCCGCAGCCGGTGCCGCCCAGGTTAAGCCCGATGTTGTTGTGGCTCAAGATGGAACTGGGCAATTCACAACATTCACTGAGGCTCTTGCAACTGTTCCAAAGAACAATAAGAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAACGAGACTGTCAAGATCCCCAAGCAATCCAGTTACATCACTATCATCGGAGATGGTCCCACCCGCACCAGATTCACCGGCCATCTCAACTATGCTGACGGTGTCCAAACTTACAATACCGCAACATTCGCCGTGAATGCTCCTTACTTCACAGCCATGCACGTAGGGTTCGAGAACTCAGCCGGAGCAATTAAGCACCAAGCCGTGGCCCTCCGAGTAACAGCAGATAAAGCTGTGTTCTACAACTGCCATATGGACGGATACCAAGACACACTTTACGCCCAGTCCCACCGCCAGTTCTACCGCGACTGCCTCATCTCCGGCACAATCGACTTCATCTTCGGCGACGCCGACATGGTCTTCCAGAACTGCACTTTGGTCGTCAGGCAGCCTTTAAGCAACCAGAACTCCATCGTCTCCGCCAGTGGCCGCAACGTGATCAACAGCCCTAGCGCCATGGTGTTCCAGAGCTGCCGCTTCATCGGCGACGAGCTCTACCTCTCCGACGCCAAGAAGAAACCGGCATATCTCGGACGGCCATGGAGGGCCTATGCCAAGGTGGTTATCATGGATTCTCAGATCGACGGCATCTTCGCTCCCGAAGGTTACTTGTCATGGATGGGTAGCATCTATCACCTGACCTCCGTCTTCAATGAGTACAACAACAAAGGTCCCGGAGCCGATACCTCTCACCGAGTGAAATGGCCCGGCGTGAAGGCCATCACCCCCGTTCAAGCCGCAAATTTCTATCCTCGCAAGTTCTATGAATTCCGCAATGCAACTACCTCTGATGATGATTCTTGGATCTCTGCCTCTGGGATTCCCTACTCCACTGGCCCCATGTAA 1800 0.5306 MGNGEHERKKKMAVISVSGILLVAMVAAVGVGLSGAGGGAAAEDHSEKKQISQKNVEMLCSSAQYKETCEHSLSKANKNGTTDIKELIKTAFHAAAKEFKKLINNSTLFEELAKDNMTKQAMEICHEVLDYAIDDVRHSIDSVEQFDISKIGQYAYDVKVWLGGTISHQQTCLDGFENTTTHAAETMAKVLNTSLELSMNALDIISGLSDVADVFGFATSFGSATQDNGIVNTTNEQAQHGNENTSSRKLLQSLPSWVSDSHHRHHLARAAAGAAQVKPDVVVAQDGTGQFTTFTEALATVPKNNKKPYVIYVKAGIYNETVKIPKQSSYITIIGDGPTRTRFTGHLNYADGVQTYNTATFAVNAPYFTAMHVGFENSAGAIKHQAVALRVTADKAVFYNCHMDGYQDTLYAQSHRQFYRDCLISGTIDFIFGDADMVFQNCTLVVRQPLSNQNSIVSASGRNVINSPSAMVFQSCRFIGDELYLSDAKKKPAYLGRPWRAYAKVVIMDSQIDGIFAPEGYLSWMGSIYHLTSVFNEYNNKGPGADTSHRVKWPGVKAITPVQAANFYPRKFYEFRNATTSDDDSWISASGIPYSTGPM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0917 599 Gene3D - 274 598 IPR012334 -
Alju06g0917 599 PANTHER PECTINESTERASE 17 588 - -
Alju06g0917 599 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Alju06g0917 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 208 IPR035513 -
Alju06g0917 599 CDD PMEI-like_3 59 209 - -
Alju06g0917 599 FunFam Pectinesterase 52 209 - -
Alju06g0917 599 FunFam Pectinesterase 4 277 598 - -
Alju06g0917 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
Alju06g0917 599 SUPERFAMILY Pectin lyase-like 276 596 IPR011050 -
Alju06g0917 599 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Alju06g0917 599 Pfam Pectinesterase 280 572 IPR000070 GO:0030599|GO:0042545
Alju06g0917 599 ProSitePatterns Pectinesterase signature 1. 305 324 IPR018040 -
Alju06g0917 599 SMART PMEI_2 51 204 IPR006501 GO:0004857
Alju06g0917 599 NCBIfam pectinesterase inhibitor domain 45 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0917 Alju-ChrAlju06 8535666 8537811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0917 5 597 Carbohydrate Esterase AT3G05610 42.088 3.48e-169 495