Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0907 ATGTGTGGAGGTGCTATCATTTCCGACTTCATTTCCATCAAGCGAGGCCGGAACCTCACCGCTGGCGACCTTTGGTCTGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGGTACTACCGCCGCTTCCGCCAAAAGCCAACCGCCTCAGAAACTCCCTCAAGTCCCCATCAATAAAGGGGCGGGTGAGAAGAAGGAGAAGAAAAGCGTGAGCGCAGGGAAAACTGGCGGGACGAAGAGCACTGGTCAGAGAGCACGCAAGAACGTGTACAGAGGAATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGAGTGTGGCTCGGCACCTACAACACCGCCGAGGAAGCCGCCAGGGCCTACGACGAGGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAGCTCAACTTCCCCGCCGCACCGCAAGAACCACCCGCCAAGAAGCGCTGCCTGAGCCCGGAGGTGAGCGAGGCGAGCAGCGATCAGACGGGGCCACGGACGCCGTATCAGGCGGATCTGGAGCTGAAGCAGCACATATCAGACCTGGAGTCGCTGCTGGGGCTGGAGCCGGAGGCAGAGATGAGCGAGCAGCAGCAGGCGGTGAGTGGCGGAGGGAGCAGCGACGGCGGCGATTGGGCGGAGTCGGTGGACCTGTGGATGCTGGACGACGTCATGATGAATCAGATGGCAAGCAGTGAGCTGTTGTACTAG 735 0.619 MCGGAIISDFISIKRGRNLTAGDLWSELDPFSDLLGFGTTAASAKSQPPQKLPQVPINKGAGEKKEKKSVSAGKTGGTKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAAPQEPPAKKRCLSPEVSEASSDQTGPRTPYQADLELKQHISDLESLLGLEPEAEMSEQQQAVSGGGSSDGGDWAESVDLWMLDDVMMNQMASSELLY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0907 244 MobiDBLite consensus disorder prediction 41 88 - -
Alju06g0907 244 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Alju06g0907 244 PANTHER DNA-BINDING DOMAIN 67 185 IPR044808 GO:0003700|GO:0009873
Alju06g0907 244 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Alju06g0907 244 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 MobiDBLite consensus disorder prediction 201 220 - -
Alju06g0907 244 MobiDBLite consensus disorder prediction 142 176 - -
Alju06g0907 244 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Alju06g0907 244 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0907 Alju-ChrAlju06 8360435 8362025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0907 1 233 AP2-EREBP Transcription Factor Family AT3G16770 43.956 3.74e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g0907 AP2 2.8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0907 06 8360435 8362025 Alju06g0907 06 8360435 8362025 ECH