Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0903 ATGGCGTCGGAGTCGGAGGGATCGGTGTCCGGGGGCTCTTCCCGGTACGTTCAACTCCCACCGCATCCGCCGTCGACTATAACGCCACCCGTCGCATCGCTCCGGCAAGGCGGCCCTGAGCCTGCTCGGATTTTCGAGGAGTTGCCGAAAGCTACCATCGTCTCTGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATTGAGTTTGAATACAAACAATTCAAGTGGCAATTGGTGAAGAAAGCCTCTCAAGTGATTTATTTACATTTTGCATTGAAGAAGCGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAAAACACCACTGTGGAGCATGATGATGAAGTAGATGATGAAACTATCTTGCATCATGATGGAAGTGCTAAAGACAGGGACGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTTTGTCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGTATTGTTAATTCTCCAGAGGTTTGCAAGTTTTTGGAGGTCTCAAAGTTATCGTTCTCACCTGAATATGGCCCCAAGTTGAAAGAAGAATACGTAATGGTGAAGCATCTGCCAAACATTTCAAAGGATGATGATTCCAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTCTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAGCCTTTGGACATTATTGTTTTTGATGTACTTCGTGCAACAGATGGGAATATAACAGGTTGCCCATCTCTAGCAACAGAAATGGTGGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGTAAAGAGTAGTGATAAAGTTAAAGATTGGGTTGCTGCTATATATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGTTCCTTTTCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAATGGTTTGTAGATGGTCAGGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGAAGCAAAATCGGAGATATATATTTGTGGGTGGTGGCTGTGCCCAGAACTGTATTTGCGGCGTCCTTTTCACTCTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAAGTGGCTCTTGCTTTGAAAATAAACAGTATTTACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTTTTACGCTATCCTGATCACTTTTCTAGTGGCGTTTACCTGTGGTCCCACCATGAAAAACTAGTTATTGTGGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGAGCACAGAGTGGGAGATTTCCCTCCTTTGATCTGGCCTGGGAAGGACTATTATAATCCTAGGGAATCTGAACCAAACTCATGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTCCACTGTGCCGTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAAAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACACTACTTGGGAAAAGACAAAGAATTGGAGATTCAAACTGAGAAACCTATCAATCATAGAAGAATGATAAGGGATGATTCATTTTCCTTATCTCCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGATGGGCCACATAATCCTAAAGGACAGCCAGAATTAAATGGGTTAAGCACCCTTTCTAATCTCAATCGGCCAATCAAGATGAGTGCTGGTCTTCCTCCTCTTTATCAGAAGGCCAAAATTCAACCAGTTGGTTCAGATGCACCAATGAAAGGCTTTGTGGATGAGATTGATTATATTAATGAAAGTGGGGAAATGTCTCAAGATAGAGTTGCTTGTGTCAGTTCAAAAGGCACAGTTCCCGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCCGATGAAATTGGACGAGTTGGTCCTCGTTCTTCCTGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCCGGGACAAGCCAAACTGAACAGAGCATCCACAATACTTATTGCTCTCTAATTGAGAAAGCTGAACACTTCATCTACATAGAGAATCAGTTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACAAAACCGTGTTTTAGAGGCTTTATATCAACGGATTATGCGAGCTTACAAAGATCAAAAAATTTTTAGGGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGGAGGCCTTGATGATAGTGGTGCAGCATCTGTTAGAGCCATAATGCACTGGCAGTATCGAACCATTTGCCGAGGACCAAAATCAATATTGCATAATCTCTGTGATCTCCTGGGTGCAAAAGCCCATGACTACATATCTTTCTTTGGCCTCAGGAATTATGGAAGACTCTTTGATGGCGGTCCGGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATAGTTGATGACCGTACAGCTTTGATTGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCTAGAGACTCTGAGATTGGTGTTGTAATAGAAGACAGAGAGTCAACCGGATCATATATGGGTGGAAAGCCATGGAAAGCAGGGAAGTTCGCGCTGACTCTTCGACTGTCATTATGGTCGGAACACTTGGGTCTCCAACCAGGAGAGTTTGATCAAATAGCGGACCCAATTGTTGAGTCTACTTATAAAGACATTTGGACGGCAAGAGCAAAGAAAAATACTGCAATTTACCAAGATGTCTTTTCTTGCGTTCCAAATGATATGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAAAGTGTTAGAATCCATTCATAATGGAGCTATCAAGAATACTGATCCCTTGGAGAGATTAGCCTCAGTGAAGGGTCATCTTGTTTCTTTTTCGTTGCAGTTCATGTGTCAGGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTTCATTGA 3336 0.429 MASESEGSVSGGSSRYVQLPPHPPSTITPPVASLRQGGPEPARIFEELPKATIVSVSRPDAGDISPMLLSYTIEFEYKQFKWQLVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTVEHDDEVDDETILHHDGSAKDRDVPSIAALPIIRPALGGQQFVSDRAMVAMQGYLNHFFGNISIVNSPEVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPNISKDDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIVFDVLRATDGNITGCPSLATEMVEPNPLRHSFKVTSGNRSIRVRVKSSDKVKDWVAAIYDAGVKPPEGWCHPHRYGSFSPPRGLIEDDSQAQWFVDGQAAFEAISSSIEEAKSEIYICGWWLCPELYLRRPFHSHASSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHRVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCAVWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIQTEKPINHRRMIRDDSFSLSPSQNIPLLLPQESDGPHNPKGQPELNGLSTLSNLNRPIKMSAGLPPLYQKAKIQPVGSDAPMKGFVDEIDYINESGEMSQDRVACVSSKGTVPEWWEAQERGDQGGFADEIGRVGPRSSCRCQVIRSVSQWSAGTSQTEQSIHNTYCSLIEKAEHFIYIENQFFISGLSGDEMIQNRVLEALYQRIMRAYKDQKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPKSILHNLCDLLGAKAHDYISFFGLRNYGRLFDGGPVATSQVYVHSKIMIVDDRTALIGSANINDRSLLGSRDSEIGVVIEDRESTGSYMGGKPWKAGKFALTLRLSLWSEHLGLQPGEFDQIADPIVESTYKDIWTARAKKNTAIYQDVFSCVPNDMIHTRVAFRQSTARWKEKIGHTTIDIGIAPKVLESIHNGAIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0903 1111 SMART PH_update 216 344 IPR001849 -
Alju06g0903 1111 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Alju06g0903 1111 SUPERFAMILY PH domain-like 249 340 - -
Alju06g0903 1111 Gene3D Endonuclease Chain A 362 600 - -
Alju06g0903 1111 SUPERFAMILY Phospholipase D/nuclease 750 953 - -
Alju06g0903 1111 PIRSF PLD_euk 681 1111 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju06g0903 1111 PIRSF PLD_euk 57 621 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju06g0903 1111 Coils Coil 100 120 - -
Alju06g0903 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Alju06g0903 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 908 935 IPR001736 GO:0003824
Alju06g0903 1111 MobiDBLite consensus disorder prediction 1 21 - -
Alju06g0903 1111 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Alju06g0903 1111 MobiDBLite consensus disorder prediction 1 36 - -
Alju06g0903 1111 CDD PH_PLD 193 340 - -
Alju06g0903 1111 FunFam Phospholipase 742 962 - -
Alju06g0903 1111 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Alju06g0903 1111 SUPERFAMILY Phospholipase D/nuclease 326 597 - -
Alju06g0903 1111 PANTHER PHOSPHOLIPASE D 167 1101 IPR015679 -
Alju06g0903 1111 CDD PLDc_vPLD1_2_yPLD_like_2 768 952 - -
Alju06g0903 1111 Pfam PLD-like domain 781 954 IPR025202 -
Alju06g0903 1111 Gene3D - 236 341 IPR011993 -
Alju06g0903 1111 Gene3D Endonuclease Chain A 706 965 - -
Alju06g0903 1111 SMART pld_4 908 935 IPR001736 GO:0003824
Alju06g0903 1111 SMART pld_4 477 504 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0903 Alju-ChrAlju06 8314074 8328281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0903 1 987 Phospholipase D Gene Family (Wang group) AT3G16785 70.121 0.0 1346