Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0878 ATGGATCCGAGTAGGAAAGGATCGGAAGCAGAGGACGCTAATGCGAGGAATCCAAATGGGGCTTCGCCGGAAGAGGGTCCGACAATGAGCGAGCAGAAGAAAACTTGCGCCGATTGCGGCACCACCAAGACCCCTCTCTGGCGCGGCGGTCCAGCTGGGCCGAAGTCACTGTGCAACGCTTGTGGAATCAAAAGCAGGAAGAAGAAGAGAGCGATTCTGGGTTTGAAAGGGAAGAGAAGCAATAGTAATAATAACAGCAATGGAAGCAGCAAGATTGGGGATAGTTTGAAGCAGAGGTTAATGGCTTTGGGAAGGGAGGTTTTGATGCAGAGATCAACGGCGGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCAGCAGTTCTATTAATGGCTCTCTCATATGGATCTGTTTATGCTTAG 426 0.507 MDPSRKGSEAEDANARNPNGASPEEGPTMSEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIKSRKKKRAILGLKGKRSNSNNNSNGSSKIGDSLKQRLMALGREVLMQRSTAERQRKKLGEEEQAAVLLMALSYGSVYA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0878 141 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Alju06g0878 141 PANTHER OS01G0976800 PROTEIN 6 141 - -
Alju06g0878 141 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
Alju06g0878 141 MobiDBLite consensus disorder prediction 1 54 - -
Alju06g0878 141 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Alju06g0878 141 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Alju06g0878 141 MobiDBLite consensus disorder prediction 21 39 - -
Alju06g0878 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 32 70 - -
Alju06g0878 141 MobiDBLite consensus disorder prediction 73 96 - -
Alju06g0878 141 MobiDBLite consensus disorder prediction 77 94 - -
Alju06g0878 141 SMART GATA_3 30 80 IPR000679 GO:0006355|GO:0043565
Alju06g0878 141 Gene3D - 31 94 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0878 Alju-ChrAlju06 8090667 8091300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0878 1 141 C2C2-Gata Transcription Factor Family AT3G06740 57.047 1.06e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju06g0878 GATA 9.3e-17 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0878 06 8090667 8091300 Alju06g0878 06 8090667 8091300 ECH