Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0858 ATGGCAAATAACTTAACGGGCCAGCTTGTTGGTTCAGAGATACATGGATTCCATACATTGCAAGAGCTTGATGTTAAGAACACTATGGAGGAAGCAAAAAGCAGATGGCTTCGCCCTAATGAGATTCATGCTATACTTAGTAATTACAAGTATTTCCCCATCCATGTAAAGCCAGTGCATTTGCCTCCAAGTGGTACTATTGTTTTATTTGACCGCAAGATGCTTAGGAACTTTCGTAAAGATGGATACAACTGGAAAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAACACTTAAAAGTTGGTGATGAAGAAAGGATCCATGTATACTATGCACACAGCCAGGATAAGCCAAAATTTGTGCGTAGATGTTATTGGCTTCTTGACAAGAGTTTGGAACACATAGTTCTTGTTCATTATCGTGAAACACAAGAGTTGCAGGGCTCTCCAGCTACACCTGTAAATTCAAATTCAAGTTCGGTCTCTGATCCAGTTGCACCATTGATTTTATCGGAAGAGTTGGATTCTGGGACCAACAATCCATATGCTGGTGAAGTTAATGACAATTTGAAACTCAGGAGTCATGAACTGAGGCTTCTTGAGCTCAACACACTTGAATGGGATGATTTAGTGATTACAAATGACCTCAACAATTCTACCACATCTATTGGAGACAAGGTTCCATATTTTGATCAACAAAATCAGTCTTTGCTGAATGGCAATTTAAGCAACGTTACTAGCAGCCTGTCTGCTGAAATTCCTTCTTTTGATAACATAACACAACCTATTACTGGGAGCAGCAGTGCACCTTATGGTTTCCCAGAAACTGTAAATCTTCAGACAACGGATAATCAAGCAAATCCGAATGCACAAAAGGGATATTCTGTCTCTGTGGGTGGTGTTGATTCCTTGGACACTTTGGTTGATGATACTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATCAACCACATGATTTCTGATTCACAATGTTCTGTAGATGAATCAGCTCTTGTATCACCTGTTATATCTATTCAAGAACCATATTCTTCTTTGGTAGAGGATCATCAGCAACCTTCTCTGCCGGAACAGCTTTTTAATATCACCGATGTCTCACCTTCATGGGCATCTTCCACTGAGAAGACCAAGATCCTAGTCACTGGAATCTTCCATGATAACTATCTACATCTTGGAAAGTCCAATATATTTTGTGTCTGCGGTGATGTAAGTGTTCAAGCTGAAATTGTTCAAGTTGGGGTCTACCGATGCTGGGTATCATCACATTCCCCAGGATTCGTAAATCTCTATATGAGCCTTGATGGCCGTAAGCCCATAAGCCAGGTTGTCAATTTTGAGTATCGTACTCCAGTTTTGCATGACCCTACACCCTCTATAGAAGAGAAGTACAACTGGGCTGAGTTTCGACTTCAAACGAGGCTTGCTTGTTTGCTCTTTGGTAGTCATAAGAGTCTTGATATTATCTCTACTAAAGTATCACCTAATGCAATAAAGGAGGCTAAAAACTTTGCTTCAAAGACCTCACTGGTTTTCAAAAGTTGGCAATACTTGGTTAAGTCAACTGAAGACAACAAAACTCCATTTCCTCGAGCAAAAGATGCACTGTTTGAAACCTCCTTGAAAAACGGATTAAAGGAATGGCTGTTAGAAAGAATTCTCTTGGGCCGTAAGACTACAGAATATGACTCCCAAGGTCAAGGTGTAATCCATTTGTGCGCAATTCTGGGATATACTTGGGCTGTTTCGTTATTTTCAGGATCAGGCTTGTCCCTAGATTTTCGAGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCACATTGTGGAAGGGAGAATATGGTTGCATTGTTGCTGTCTGCTGGGGCAAAGCCTAACTTAGTCACAGATCCTACTCCACAAAATCCTGGTGGATGTACTGCCGCTGATCTTGCTTATATGAAGGGTTATGAGGGCTTAGCAGCTTATCTTTCGGAAAGATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATTAGTGGCAAACTGGAAACAAGCACAAATGATCCGGTAGAGTATGAGAATCTTACTGAGGACCAACTGTACCTAAAGGATACATTGGCAGCTTACCGAACAACTGCTGAGGCGGCAGCACGAATACAGGCTGCATATAGGGAGCACTCACTAAAAGTACAAGCAAAGGCAATTCAGAGTTTAACTCCAGAGGATGAGGCCCGCATGATTGTTGCAGCATTGAAGATTCAACATGCCTACCGCAACTATAACGCAAAGAGGATGATGGCAGCTGCAGCTCGCATCCAGCATAGGTTCCGTACATGGAAATTGCGTAAAGAATTTCTCAACATGCGACGTCAGGCTATCATAATCCAAGCTGCTTTCCGGGGCTACCAAGTGAGGAAGCAGTATCGAAAAATTCTCTGGTCTGTTGGAGTACTTGAAAAAGTAATCCTGCGATGGCGACTGAAGAGAAAAGGCTTCCGTGGACTTCAGGTTAACCCTGTCCAACAAGAGCAAGAGCCAAAGCAGGAAAGTGACGCAGAGGAGGACTTCTTCCGGACTGGTCGGAAACAAGCAGAAGAACGCGTGGAGAGATCTGTAGTACGTGTTCAGGCAATGTTCCGTTCAAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGGCTCACAATCAGGCAAAGTTGGAACTTGAATATGAAGAGCTGCTCAATTCAGAGGTTGATATATTATAG 2760 0.4239 MANNLTGQLVGSEIHGFHTLQELDVKNTMEEAKSRWLRPNEIHAILSNYKYFPIHVKPVHLPPSGTIVLFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHSQDKPKFVRRCYWLLDKSLEHIVLVHYRETQELQGSPATPVNSNSSSVSDPVAPLILSEELDSGTNNPYAGEVNDNLKLRSHELRLLELNTLEWDDLVITNDLNNSTTSIGDKVPYFDQQNQSLLNGNLSNVTSSLSAEIPSFDNITQPITGSSSAPYGFPETVNLQTTDNQANPNAQKGYSVSVGGVDSLDTLVDDTLQSQDSFGRWINHMISDSQCSVDESALVSPVISIQEPYSSLVEDHQQPSLPEQLFNITDVSPSWASSTEKTKILVTGIFHDNYLHLGKSNIFCVCGDVSVQAEIVQVGVYRCWVSSHSPGFVNLYMSLDGRKPISQVVNFEYRTPVLHDPTPSIEEKYNWAEFRLQTRLACLLFGSHKSLDIISTKVSPNAIKEAKNFASKTSLVFKSWQYLVKSTEDNKTPFPRAKDALFETSLKNGLKEWLLERILLGRKTTEYDSQGQGVIHLCAILGYTWAVSLFSGSGLSLDFRDKFGWTALHWAAHCGRENMVALLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGYEGLAAYLSERSLVEQFNDMSLAGNISGKLETSTNDPVEYENLTEDQLYLKDTLAAYRTTAEAAARIQAAYREHSLKVQAKAIQSLTPEDEARMIVAALKIQHAYRNYNAKRMMAAAARIQHRFRTWKLRKEFLNMRRQAIIIQAAFRGYQVRKQYRKILWSVGVLEKVILRWRLKRKGFRGLQVNPVQQEQEPKQESDAEEDFFRTGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAKLELEYEELLNSEVDIL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0858 919 FunFam Calmodulin-binding transcription activator 2 768 816 - -
Alju06g0858 919 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Alju06g0858 919 Coils Coil 885 905 - -
Alju06g0858 919 Gene3D - 539 673 IPR036770 -
Alju06g0858 919 SUPERFAMILY Ankyrin repeat 549 667 IPR036770 -
Alju06g0858 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Alju06g0858 919 FunFam Calmodulin-binding transcription activator 5 364 460 - -
Alju06g0858 919 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Alju06g0858 919 Pfam Ankyrin repeats (3 copies) 557 634 IPR002110 GO:0005515
Alju06g0858 919 ProSiteProfiles IQ motif profile. 769 795 IPR000048 GO:0005515
Alju06g0858 919 Gene3D - 767 816 - -
Alju06g0858 919 Gene3D Immunoglobulins 364 459 IPR013783 -
Alju06g0858 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Alju06g0858 919 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515
Alju06g0858 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 901 - -
Alju06g0858 919 SMART ANK_2a 605 634 IPR002110 GO:0005515
Alju06g0858 919 SMART ANK_2a 644 675 IPR002110 GO:0005515
Alju06g0858 919 SUPERFAMILY E set domains 369 456 IPR014756 -
Alju06g0858 919 SMART iq_5 871 893 IPR000048 GO:0005515
Alju06g0858 919 SMART iq_5 768 790 IPR000048 GO:0005515
Alju06g0858 919 SMART iq_5 715 737 IPR000048 GO:0005515
Alju06g0858 919 SMART iq_5 791 813 IPR000048 GO:0005515
Alju06g0858 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Alju06g0858 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 712 819 IPR027417 -
Alju06g0858 919 SMART CG_1_2 29 146 IPR005559 GO:0003677
Alju06g0858 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0858 Alju-ChrAlju06 7907928 7919967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0858 29 905 CAMTA Transcription Factor Family AT3G16940 56.086 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Alju06g0858 Ank_2 4.1e-08 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0858 06 7907928 7919967 Alju06g0858 06 7907928 7919967 ECH