Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0824 ATGGAAGACTTGCATCCATTCAGCAAGTTCAATTTTGAAGCTGTAGTTGAGGACAAATATAGTTCATCCAACGACGATTTCTGGAACTCATCATCAGATCCACTGGATCAGCATCATCATAATGAAGTACTGGAAAACGTTAAGGTTTCCCAAGCAGAAGATTGGGGAGACTCAGGTGGATTGGATTCCCTCTGCTCTATCAACAATATCCGATTCTTCCCCGATCATTACTATTCGTCCTCAGAAGATTGCCTTTTATCCTTCACTAACCAACAGAAGGATCAATTGTCGAATCTAGATTATGGTTCGTTGGATAATCTCCGGTTCGACATGGTCGTCTCCTCACCGCTCGGTGATGCCCCCAAGTTTGACGATCAAATCTCAGCCAAGGCTGATCTCTCCCGATCTTACAAGAACTACCAGAACCAGAATTTTTCTCTTCCTTTAGCTTCACTTGATCTTCTCAACAACTACGGTAATGGATTAAAGCGTTTATACGGCGAAACTGAACCACATGATGTTCATCAGGTTCAGCGTATTGATGATTTGAGAGGAAAGAAGAAGCTCTCAACTGAGGAAGTGATGAGAATCGCCGCAACAATGTTCATCCGATCATCATCTTCAGATCAATCGGAGGGTTTGGATTCTTTAATTCCCCACCCTTATGATTGCTACTACTCTAACCTTTCCGAGGAAGAAAAAGAGGACGTGAAGCTCGCAGAATCGCTTCTTGCTTGTGCCGAGAAAGTCGGGTTAGGTCAATTCGAACGAGCAGCCAAACTTCTTGACCACTGCGAATCTCAGTCTTCCAAGACCGGGAACGCCGTGAAACGCGTCGTCTCGTACTTCTGCGACGCTCTTCGCGAAAGGATAAACAGAGAAACAGGAAGACCTAATTGCGCTCCTCCATTTTCGCCGGTGGGAGAAATCCCTCGTCATTATTATAAATACAGAGAAAAGGAATTCTCACTTTTCGATCCAGACAAGTCAATGCAGAATCCGGGCCCTACTATGCTCGCGTGCCACGTTCATATTCCTTTCTGTCAGGTTGCAAAGTTCGCCGGAATCCAAGCCATGTTAGAGAAATTAAGCAATTCGAAAAAGATTCACATAATCGATCTCGAAATTAGAGTAGGATCCCAATGGACAATTCTAATGCAAGCACTTGCATTACGACGAGAATGCCCACTCGAGCACTTGAAAATAACAGCAGCAGGAACGGCACCGAAGGATACACTGGAGGAAACGGGTAAGAGATTAACCAATTTTGCAGAATCCCTAAACATACCCTTCTCGTTCAACATAGTTACGGTATCCGACATGAATGAGCTTAAGGAAGAACTGTTCGAGCTAGACGGCAAGGAAACAATCGCAGTTTACGCTATGTTCGCACTAAGGCCCCTGATTGCAGATTCAGATCAGCTAGAAGCGATGATGAAGGTGATAAGAAATTTGAATCCGATCGTGATGGTGGTGACGGAGGTGGAAGCGAACCACAACTCAAAGTCATTCGTGAAGCGATTTACGGAAGCTCTGTTCTACTTCAGCGCATTCTTCGATTGTGTGGAGGAATCCATGGAAGGGGACAATCCGAACAGGAGGGTGTTGGAGTCATTGTATTTAAGATTTGGGATTAGGGATATTGTGGCGGCGGAGGGAGAGAAGAGGAAGATTAGGAGCGTGAAGATTGAAGTGTGGAGGGCTTTCTTGGGGAGGTTTGGGATGGTGGAGGAAGAACTGAGTAAGTCGTCGTTGTACCAGGCGGAGCTGGTGGCCAAGACATTTTCCGGCGGCAATTCCTGCACCTTTCACATGGATGGAAGTAGTTTGCTCCTTGGCTGGAAGGGAACCCCACTTTACTCTCTTTCTGTCTGGAAATTCCTTTGA 1887 0.4563 MEDLHPFSKFNFEAVVEDKYSSSNDDFWNSSSDPLDQHHHNEVLENVKVSQAEDWGDSGGLDSLCSINNIRFFPDHYYSSSEDCLLSFTNQQKDQLSNLDYGSLDNLRFDMVVSSPLGDAPKFDDQISAKADLSRSYKNYQNQNFSLPLASLDLLNNYGNGLKRLYGETEPHDVHQVQRIDDLRGKKKLSTEEVMRIAATMFIRSSSSDQSEGLDSLIPHPYDCYYSNLSEEEKEDVKLAESLLACAEKVGLGQFERAAKLLDHCESQSSKTGNAVKRVVSYFCDALRERINRETGRPNCAPPFSPVGEIPRHYYKYREKEFSLFDPDKSMQNPGPTMLACHVHIPFCQVAKFAGIQAMLEKLSNSKKIHIIDLEIRVGSQWTILMQALALRRECPLEHLKITAAGTAPKDTLEETGKRLTNFAESLNIPFSFNIVTVSDMNELKEELFELDGKETIAVYAMFALRPLIADSDQLEAMMKVIRNLNPIVMVVTEVEANHNSKSFVKRFTEALFYFSAFFDCVEESMEGDNPNRRVLESLYLRFGIRDIVAAEGEKRKIRSVKIEVWRAFLGRFGMVEEELSKSSLYQAELVAKTFSGGNSCTFHMDGSSLLLGWKGTPLYSLSVWKFL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0824 628 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 212 621 IPR005202 -
Alju06g0824 628 Pfam GRAS domain family 240 626 IPR005202 -
Alju06g0824 628 ProSiteProfiles GRAS family profile. 230 626 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0824 Alju-ChrAlju06 7646565 7648451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0824 231 627 GRAS Transcription Factor Family AT1G66350 30.827 6.16e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju06g0824 GRAS 3.2e-87 CL0063