Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0811 ATGGGAACTCCACCACCAGAAGAGCTTCTCAGGAAGATCGAGAATCTCGAGGCGGGTCACGCACACCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCAAGCGATGCTCGGGCCGAGCATAGCCATCATCGCCAGAGGTCTCACTCGATATCGCCGCAACGTTCGAGATTGGGTGTGCCCAGTAGGAGAGCCGGAGGCGGCGGATTCGATGGACCGGCTTCGTTGAAGAAAGGTTCGACTTCGTTTAAACATTCATCACCGCTTCAGAGGGAAAGCCGTATTAGTGATCCTCAAAATGATGGAGAAGGTGGCGTTGGAAGAGGCCCTTCAGCTGTGAATTTTACTGATAAGCAGTGTCGCAATATTTTGCAGTCAATGGGGCACGCTGTTCACATATTGGATCTTACCGGTCTTATAATATACTGGAACCGTAGTGCTGAACATCTATACGGTTATTCGTCGGACGAAGCCCTTGGTAAGGATGGCATTGAGCTCCTTGTAGACCCCAGGGATTTTGCCCTAGTCAATGATATAATCAACCGGGTCACTATGGGAGAGAAATGGCTTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTGGCTGTGGCTACCAATACTCCATTATATGACGATGATGGAAGTTTGATTGGCATTATTTGTGTCTCTAGTGATTCACGACCCTTCCTTGAAGTAAGAGTTCCGTTCTCAGGAGTAAAGCACTTTGAAACAGGTTCAGGCTCCAGCAATCTTAGAAGTAGCATTACAAATAAACTTGGTCTTGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCGAAAATTACAAATTTGGCGTCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAACAGGAGACAATAATGTGGATCATGAAGGTGGGAGTGGTGAAAGTCATCATTCTGAGCATAGCTACTCAGATATGGTTCTTCCAGACCAGAGAGAAGATGCAAATTCTAGTGGAGCTAGCACACCCAGGGGAGATGTTCCCCAATCTGCCTTTGGTGTATTTTCTCACACAGAAGACAAAAGTCCAGGAAAATTTTTTAGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATTCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAAAACACTATCATGGAGGGATGGATCAGAGGGAAGGAATGTTCGTGTTGGTTGGCCTTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGGAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATCTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCTTGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCAGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTGATAATGTCCTTCCGACAAGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTGTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCACTTACTCCAGAAAAACACAGCTAAACTTGACTGGAGACGGCGTGCTCATATGGCTTTAGATATTGCACGGGGTGTAAACTATCTTCATCACTGCAGTCCACCTATTATTCATCGAGATTTGAAGACTTCAAATCTTCTAGTTGACAAGAACTGGACAGTGAAGGTTGGTGATTTTGGCCTTTCACGCCTAAAGCATGAAACATATCTCACAACAAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCCTCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGACTCTCAACTCAATACAGGTGATTGTAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTTGATCCTAAGTGGGCTGCTATAATTGAGAGCTGCTGGCATACTGATCCAGCCTGCCGGCCAACATTTCAGGAATTGCTGGAAAAGCTTCGAGAGCTGCATAGACGTTATGCCCTTCAATTTCAAGCAGCTCGTACTGCTGGTGCTGAAAACACTCAAAAGGAGCCCTAA 2301 0.4537 MGTPPPEELLRKIENLEAGHAHLKQEMSKLKLSGASDARAEHSHHRQRSHSISPQRSRLGVPSRRAGGGGFDGPASLKKGSTSFKHSSPLQRESRISDPQNDGEGGVGRGPSAVNFTDKQCRNILQSMGHAVHILDLTGLIIYWNRSAEHLYGYSSDEALGKDGIELLVDPRDFALVNDIINRVTMGEKWLGQFPAKNKMGEKFLAVATNTPLYDDDGSLIGIICVSSDSRPFLEVRVPFSGVKHFETGSGSSNLRSSITNKLGLDSQQPLQVGIASKITNLASKVSNKVKSRIRTGDNNVDHEGGSGESHHSEHSYSDMVLPDQREDANSSGASTPRGDVPQSAFGVFSHTEDKSPGKFFRDSGDEGEGKPIHKVLTSKAEAWIQKKTLSWRDGSEGRNVRVGWPWLQNDQENEPAQRKPLSSCVRPESQAGEGNRPVNNEASGSWSSFNLNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFHLLQKNTAKLDWRRRAHMALDIARGVNYLHHCSPPIIHRDLKTSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWETLNSIQVIVAVGFMNQRLEIPKDVDPKWAAIIESCWHTDPACRPTFQELLEKLRELHRRYALQFQAARTAGAENTQKEP 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0811 766 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Alju06g0811 766 Coils Coil 13 33 - -
Alju06g0811 766 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 231 746 - -
Alju06g0811 766 FunFam PAS domain-containing protein tyrosine kinase family protein 566 757 - -
Alju06g0811 766 MobiDBLite consensus disorder prediction 291 319 - -
Alju06g0811 766 ProSiteProfiles Protein kinase domain profile. 488 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0811 766 MobiDBLite consensus disorder prediction 355 370 - -
Alju06g0811 766 PRINTS Tyrosine kinase catalytic domain signature 667 689 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 PRINTS Tyrosine kinase catalytic domain signature 601 619 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 PRINTS Tyrosine kinase catalytic domain signature 648 658 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 PRINTS Tyrosine kinase catalytic domain signature 711 733 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 PRINTS Tyrosine kinase catalytic domain signature 562 575 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 MobiDBLite consensus disorder prediction 290 319 - -
Alju06g0811 766 Pfam PAS fold 121 227 IPR013767 GO:0006355
Alju06g0811 766 SMART serkin_6 488 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g0811 766 CDD STKc_MAP3K-like 494 740 - -
Alju06g0811 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Alju06g0811 766 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Alju06g0811 766 MobiDBLite consensus disorder prediction 80 96 - -
Alju06g0811 766 MobiDBLite consensus disorder prediction 348 370 - -
Alju06g0811 766 SUPERFAMILY Protein kinase-like (PK-like) 476 739 IPR011009 -
Alju06g0811 766 Gene3D Phosphorylase Kinase; domain 1 481 565 - -
Alju06g0811 766 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Alju06g0811 766 CDD PAS 131 229 IPR000014 -
Alju06g0811 766 FunFam PAS domain-containing protein tyrosine kinase 481 565 - -
Alju06g0811 766 Pfam Protein tyrosine and serine/threonine kinase 488 740 IPR001245 GO:0004672|GO:0006468
Alju06g0811 766 Gene3D Transferase(Phosphotransferase) domain 1 566 765 - -
Alju06g0811 766 Gene3D PAS domain 129 232 - -
Alju06g0811 766 MobiDBLite consensus disorder prediction 408 446 - -
Alju06g0811 766 MobiDBLite consensus disorder prediction 25 113 - -
Alju06g0811 766 SMART pas_2 119 186 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0811 Alju-ChrAlju06 7446155 7452849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0811 1 762 MAP Kinase Kinase Kinase AT3G06620 61.735 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Alju06g0811 PK_Tyr_Ser-Thr 1.4e-67 CL0016