Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0767 ATGGACATGGATATGGAAACTTCAGAAATCAACGGTGGAAGCTGCAAACTCCAAAACGACGACGAATTGGACCTCCGGCGAGGCCCTTGGACCGTCGACGAAGACCTGACCCTCATCAATTACATTGCCACTCACGGCGAAGGTCGCTGGAATTCCCTCGCTCGATCCGCCGGGCTCAAACGAACTGGTAAGAGCTGCAGATTGAGATGGCTCAACTATCTCCGGCCCGATGTCCGACGTGGCAACATCACCCTCGAAGAACAGCTCCTGATTCTCGAGCTCCATTCTCGCTATGGCAACAGATGGTCGAAAATCGCGCAGTACTTGCCGGGAAGGACTGACAACGAGATCAAGAACTACTGGAGAACACGAGTTCAAAAACACGCGAAGCAGCTCAAATGTGACGTGAACAGCAAGCAATTCAAGGACACCATGCGCTACCTCTGGATGCCCAGGCTCGTCGAGCGTATTCAAGCCTCCTCCGCCGCCGCCCCGGCCGCCGCAGTCTCCGTTTCACCGCCTTTATCTACCATCGCCGCCACCGCCACTCCTCCCAATCACGCCCCATACAATTACAACAATTTCGAGTTTGGGCCGGCGGGCGCCTCTCAGGTCACCGGAAGCAACTACACGACGACTGAGAATAGCAGCGCGGCGGCTTCGTCCGAGTCGTTTGGGTCAACTCAGGTGTCGGACTTGACGGAGTATTATTACGGTGGGGTTCCGGTTGGGAATAGGGGTAACCCTAATCCGGATTACGGTCAAACCGGGGAATGGAGCTACTCGGATAGCATGAGCAGCTTGGATATGCAAACCGTGAAGCCAAACAACAACAGCAGCAACTACCAGTATTGGGGAGGGGACACGTCAGACAATTTTTGGAATGTTGAGAACATGCTGTTTTTACAGCAACAGCTCAGTGACAACATGTAA 933 0.5391 MDMDMETSEINGGSCKLQNDDELDLRRGPWTVDEDLTLINYIATHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRYGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQASSAAAPAAAVSVSPPLSTIAATATPPNHAPYNYNNFEFGPAGASQVTGSNYTTTENSSAAASSESFGSTQVSDLTEYYYGGVPVGNRGNPNPDYGQTGEWSYSDSMSSLDMQTVKPNNNSSNYQYWGGDTSDNFWNVENMLFLQQQLSDNM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0767 310 SMART sant 79 127 IPR001005 -
Alju06g0767 310 SMART sant 26 76 IPR001005 -
Alju06g0767 310 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Alju06g0767 310 Gene3D - 24 80 - -
Alju06g0767 310 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Alju06g0767 310 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 23 211 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju06g0767 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Alju06g0767 310 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Alju06g0767 310 CDD SANT 95 123 IPR001005 -
Alju06g0767 310 FunFam Myb transcription factor 27 79 - -
Alju06g0767 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 74 IPR017930 -
Alju06g0767 310 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Alju06g0767 310 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Alju06g0767 310 Gene3D - 84 147 - -
Alju06g0767 310 FunFam MYB transcription factor 84 147 - -
Alju06g0767 310 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0767 Alju-ChrAlju06 7020602 7021989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0767 20 263 MYB Transcription Factor Family AT3G06490 63.200 1.23e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju06g0767 Myb_DNA-binding 4.3e-15 CL0123