Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0741 ATGGAGGCTAAATTTCGGGGGAAGAATCAGTATGTCTATGGACCTGTGGTGCCGGAAATGAAAGCGGTTGGAAAGAAGAGTTTGGACTGGAATTTGGAAGACTGGAAATGGGACGGAGATCTTTTCACTGCTAGTCCATTAAATTCAGTTCCATCTGATTGTAGAAATAGGCAGTCTTTCCCAGTTGATTCTGAAATTCCTGCGAAAGCTAATACGTCTAACATTTCTTCTAATTGGGATGAGGTCAACCCAGAGAAAGGAAAGAGAGAATTGGAAAAAAGGAGGAGAGCTGTTGTATCTGAAGGTGATGAGCTGAATGATGAAGCTGGTTGTCTTAATTTAAACCTTGGGGCTCAAATTTACCCTATCATGGAGGGGGATGAAAAAAGTGGAAAGAAGACAAAGATAGTTGGGAGTGGGACTACTTCAAACCGAGCGGTTTGTCAGGTGGAAGATTGTAGGGCCGATCTTAGTAATGCAAAAGATTACCACCGCCGGCATAAGGTTTGTGATATGCATTCCAAGGCCTGCAAAGCACTGGTAGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACACACCCTGATGCTGTTGTTAATGGAGGCTCCCTGAATGATGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCCAATATGCACTCAAATGGCTCAGATGCTACTAAGGACCAAGATATTCTCTCTCATCTGCTAAGGAATCTGGCAAGTCTGGCTGGTACAATCAATGGAACGAACATAGCCTCCTTATTGGAGGGATCCCAAGGTTTGGTGAATGCTGGGACATCTGGAACTTCCCAAAAAGTGCCTAATCTAAATTCAAATGGTCCTGAACCCATCAGATCACCTGGTTCTTCCATCAAGACAGATAATGGTCTCAGCCGTCAGGACCCTCCAAAGCCTCTGGGACAGTCTGAGACAGTGCCTGCATATGATATGGCACAAAAATGTGTACTTTCAGGTGATATTGGGGTTGGAAGTTTAAAATCTCCTTCAGGATTACAGCCTTCAAATGTGCTTCTGACAAGGGATGGCCTTCCACCCCAATCAGTTGCAGCTGAGACTACAGTTAGAAGGAACGGTTTAAATCACATTGACCTCAATAACGTATATGATGACATACAAGATGATGCTGAGAATCTTTGGAAGTCTCATCCACCTGGGGCTTCAGGTATTGGATCTCTTGATCATCCTTCATGGTTACAACTTGACACTCAAAAGTCAAGTCCACCACAGACAAGCAGAAACTCAGATTCAACCTCCTCTCAGTCACCTTCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGTTCCAAATGATTTTCCCCTTGTTCTTCGATCACAGATTCTCAGCTGGTTATCCCACAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGCATCATTTTAACAGTATATCTCTGTCTAGAAAAATCTGCATGGGAGGAGCTCTGCAGTAATTTAGGGATCAGCTTGAAAAAGCTTCTTGCTGCATCAAATGATCCTTTCTGGACGACGGGTTGGGTATATGCAAGAGTGCAGCATTCTGTAGCCTTTTTGTACAATGGTCAGGTTGTTTTAGACGTTCCCTTGAGCCTTAGAAGCCCACAACACTGTAGGATTTCATGTATTAAACCACTTGCCGTTTCTTCAATGGCAAGTACTCAATTTGTTGTCAAAGGTGTCAACCTTTTCCATTCTAGCACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGGCACAGCATAGTTGTTGTGACTTGATTGATGGTGTTGATGCAGCTATTGAACATGATCAGCATCAGTGCCTTAGCTTCTCTTGTACCATACCAAGTGTTACTGGGAGGGGATTTATTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTTGCGGAGCCAGCAATTTGTACAGAGATCTGTAATCTGGAGAGTGTGATTGAGGCAGTTGAGATCTGTAAAGATGTACAGATAAGAAGCAAACAAATGGAAGAAAGGACTCGAGCCTTGGATTTCATACAAGAAGTGGGTTGGCTCCTTCATAGAAGTCGTGTGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCTGTTCCAATTCAATCGGTTCAAGTGGCTTGTTGACTTCTGCATGGACCATGATTGGTGTGCTGTGATGAAAAAACTTCTGGACATTGTGTTTGAGGGAACTGTTGATGCAGGAGAACATACCTCTGTCGAGCTTGCATTGTTAGACTTGGGTCTTCTGCATAAAGCTGTGAGGAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAAATTCGTACCAGTTCAATCTTCAGATGATGACAGTAAGGAGAAACAAGTTGGCAGGCACTCTGACAGGTTCTTATTTAAACCAGATAGTGCTGGCCCTGCTGGTTTGACTCCCCTTCATGTTGCGGCAAGCATGCACGGCTCAGAGAATGTATTGGATGCATTAACTGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACAACACGGGTTTGACCCCGGAGGACTACGCATCCATGAGGAGCTACCACTCCTACATTGAACTCGTCCAGGCAAAAACAAGCAAGAAAGGTGATGAGACTCGTCACCATGTGATCGACATCCCATCTTCCCTTGTTGATAGTAACACAAAGAAGAAGCAAAGGTCGTCATCAAAAGTTTCGAGCTTGCAAACTGAGAAGATTGAAAAGGCCGCGGCAGCAGTAGCAACGATCCCACATCAGTGTGGGCTATGTCAGCACAAGCTGACTTGTCACAGCACAAGGACAGCACTTGTTTATAGGCCAGCAATGCTCTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCGCCCCAAGTCTCCTATGTCTTCCAGCCCTTCAGATGGGAATCATTAGAGTATGGCTCAATGTAG 3108 0.4498 MEAKFRGKNQYVYGPVVPEMKAVGKKSLDWNLEDWKWDGDLFTASPLNSVPSDCRNRQSFPVDSEIPAKANTSNISSNWDEVNPEKGKRELEKRRRAVVSEGDELNDEAGCLNLNLGAQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDMHSKACKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDATKDQDILSHLLRNLASLAGTINGTNIASLLEGSQGLVNAGTSGTSQKVPNLNSNGPEPIRSPGSSIKTDNGLSRQDPPKPLGQSETVPAYDMAQKCVLSGDIGVGSLKSPSGLQPSNVLLTRDGLPPQSVAAETTVRRNGLNHIDLNNVYDDIQDDAENLWKSHPPGASGIGSLDHPSWLQLDTQKSSPPQTSRNSDSTSSQSPSSSSGEAQSRTDRIVFKLFGKVPNDFPLVLRSQILSWLSHSPTEIESYIRPGCIILTVYLCLEKSAWEELCSNLGISLKKLLAASNDPFWTTGWVYARVQHSVAFLYNGQVVLDVPLSLRSPQHCRISCIKPLAVSSMASTQFVVKGVNLFHSSTRLLCALEGKYLAQHSCCDLIDGVDAAIEHDQHQCLSFSCTIPSVTGRGFIEVEDHGLSSCSFPFIVAEPAICTEICNLESVIEAVEICKDVQIRSKQMEERTRALDFIQEVGWLLHRSRVKARLGPMAPVQDLFQFNRFKWLVDFCMDHDWCAVMKKLLDIVFEGTVDAGEHTSVELALLDLGLLHKAVRRNCRPMVELLLKFVPVQSSDDDSKEKQVGRHSDRFLFKPDSAGPAGLTPLHVAASMHGSENVLDALTDDPGMVGIKAWKSARDNTGLTPEDYASMRSYHSYIELVQAKTSKKGDETRHHVIDIPSSLVDSNTKKKQRSSSKVSSLQTEKIEKAAAAVATIPHQCGLCQHKLTCHSTRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFRWESLEYGSM 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0741 1035 SUPERFAMILY SBT domain 146 227 IPR036893 GO:0003677|GO:0005634
Alju06g0741 1035 Pfam SBP domain 148 221 IPR004333 GO:0003677
Alju06g0741 1035 MobiDBLite consensus disorder prediction 214 233 - -
Alju06g0741 1035 Gene3D - 138 209 IPR036893 GO:0003677|GO:0005634
Alju06g0741 1035 ProSiteProfiles Zinc finger SBP-type profile. 145 222 IPR004333 GO:0003677
Alju06g0741 1035 FunFam Squamosa promoter-binding-like protein 14 139 209 - -
Alju06g0741 1035 SUPERFAMILY Ankyrin repeat 802 913 IPR036770 -
Alju06g0741 1035 Coils Coil 88 108 - -
Alju06g0741 1035 MobiDBLite consensus disorder prediction 300 346 - -
Alju06g0741 1035 MobiDBLite consensus disorder prediction 420 473 - -
Alju06g0741 1035 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 93 897 IPR044817 GO:0003677
Alju06g0741 1035 MobiDBLite consensus disorder prediction 68 88 - -
Alju06g0741 1035 MobiDBLite consensus disorder prediction 438 473 - -
Alju06g0741 1035 Gene3D - 784 931 IPR036770 -
Alju06g0741 1035 MobiDBLite consensus disorder prediction 300 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0741 Alju-ChrAlju06 6716917 6723104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0741 1 1034 SBP-box Gene Family AT3G60030 47.810 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju06g0741 SBP 1.1e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0741 06 6716917 6723104 Alju06g0741 06 6716917 6723104 ECH