Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0718 ATGGAAGGACAGGTTTCATTAAAAGAACTGCTGCAAGTTGAGAAAGAGCCATCACACACATGTGACAATAAAACCCAAGAAACCTCCATTAACAACACTATGGGGTTCAATTTTCTCAGTTTGGGCCTGAATATCTCAGGAAAAAACCACCAAAATCAAGAGCAGCCAATTAACCAAGCAGGTTTGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGGGCTATGCTAAAACAGATTACTGAGCACTACACTTCTCTTCAGAATCACCTTCTTTTGGCTACGCACAAGGAGCCGCAATCACCACCACCTCCAAATTATCAAGATTTTCTGAAGCAGAATAGAGCAGATCATGTCAGAGTGATGGAGAAACCAGCCTTGGAAGGAGCTAAAAGAATTACAGATCAAGCATTTGAACCATGTTGCAGGAAGGCTAGAGTTTCCATAAGGGCCCGTTCAGATTTTTTTCTGATAGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGACAGCAAAGAATAACCCTTGTCCTCGAGCTTATTATCGTTGCAGCATGGGAAATGAATGCCCAGTTCGTAAACAGATGCAAAGGTGTGCTCAGGATGATACTATATTTATTACAAGTTATGAAGGAAGCCACAATCATCCACTCCCTGCAGCAGCCAAACCTATGGCAAGCATAACATCAGCAGCATTAAGCATGTTACTTTCAGGCTCAACCACTAGTCCTACACAAAATAATAGCACCACTCTCCTAAATTCAGGCTTATTCTCTTCATTATCTACTTCTTCCTCTAGTGGCCTGGCTCCATCATGTCCTACAATAACACTGGACTTGACCATGCCCTCTAAAAACGACTCTTTGAACTTCCAAAGGCCTACCTCATCACTGAACCAGAGCCAATCATTCCCTTTCTCATTGCACGGCTCTGCTCAAGAAACTGAGAGTCTGAACTTGTTTGCTAAGTCTCTGACCACAATGGAGCCTGAGAAAAATCTTTGCTTGGAGGATTTAGTTGTTGCAGCTATGGCCAAAGATCCTTCTTTTAAAGCAGCATTTGTTACAGCAATGTCTTCATTCACTGAAGAAACTCAGAAACTTAATAACAACAATGAACTGAGTAAGAGTGGGTATGACCCTTCTTCTAAGATGCCCTCTTTGCTGAATCAGTCCTGCACCACCGGATTGATTCAGAGCCGACCCTTGTAG 1224 0.4224 MEGQVSLKELLQVEKEPSHTCDNKTQETSINNTMGFNFLSLGLNISGKNHQNQEQPINQAGLLRIKLEEAKKENQNLRAMLKQITEHYTSLQNHLLLATHKEPQSPPPPNYQDFLKQNRADHVRVMEKPALEGAKRITDQAFEPCCRKARVSIRARSDFFLIGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNECPVRKQMQRCAQDDTIFITSYEGSHNHPLPAAAKPMASITSAALSMLLSGSTTSPTQNNSTTLLNSGLFSSLSTSSSSGLAPSCPTITLDLTMPSKNDSLNFQRPTSSLNQSQSFPFSLHGSAQETESLNLFAKSLTTMEPEKNLCLEDLVVAAMAKDPSFKAAFVTAMSSFTEETQKLNNNNELSKSGYDPSSKMPSLLNQSCTTGLIQSRPL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0718 407 Coils Coil 60 87 - -
Alju06g0718 407 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g0718 407 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g0718 407 MobiDBLite consensus disorder prediction 372 395 - -
Alju06g0718 407 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g0718 407 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 46 376 IPR044810 GO:0003700
Alju06g0718 407 SUPERFAMILY WRKY DNA-binding domain 156 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju06g0718 407 Gene3D WRKY domain 147 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0718 Alju-ChrAlju06 6424296 6426389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0718 134 285 WRKY Transcription Factor Family AT4G04450 62.420 1.81e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju06g0718 WRKY 4.4e-22 CL0274