Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0712 ATGAGAACAGGAGAACAAGTTGATGGGCAACAAACCCAGTCGTCATCATCTTCTTCTTCTTCAATTGATAGCAGTAATTTCCCTCTTGGGACTGCGAAACCTGCAACAGCTTCTTCTTCATGTCTCTCAAGTGTTTGTAGAAATGCTTGTAACAGTTCCAGAACTGATTTGATCACTGACCTCAGACTCGGTCTTACCATTTCTCCTTCTTCTTCTCAACCTGGCTTTCCCAATTCAAATCCCAGGTCAAGGAATCAAACTTCAGATTGGCCTCCAATAAAGTCAATACTGAGAAGCACTCTTGTGGAGAAACAAAACCAGTGGAGCCAATTAAAGCCTTCCTTATTTGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAATTGAACCTTCTGGCTCACCATAGTTATGATGGACTTGTCAGAGCCCTAGGCCACATGTTCAGGACCACCATTCTCTGCCCTAATTCCCAGCCACTTCAATCTGGAAATTTTCACGTGTTAACTTATGAGGATCAAGAAGGAGACTGGATGATGGTTGGAGATGTTCCATGGGAGATGTTCTTGACCAGTGTGAAAAGACTGAAGATCACCAGAGCAGACAGATGCTAG 615 0.4341 MRTGEQVDGQQTQSSSSSSSSIDSSNFPLGTAKPATASSSCLSSVCRNACNSSRTDLITDLRLGLTISPSSSQPGFPNSNPRSRNQTSDWPPIKSILRSTLVEKQNQWSQLKPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRALGHMFRTTILCPNSQPLQSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0712 204 Gene3D - 109 204 - -
Alju06g0712 204 MobiDBLite consensus disorder prediction 1 37 - -
Alju06g0712 204 MobiDBLite consensus disorder prediction 68 91 - -
Alju06g0712 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 58 202 IPR003311 GO:0005634|GO:0006355
Alju06g0712 204 SUPERFAMILY CAD & PB1 domains 109 198 - -
Alju06g0712 204 ProSiteProfiles PB1 domain profile. 114 203 IPR000270 GO:0005515
Alju06g0712 204 Pfam AUX/IAA family 74 200 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0712 Alju-ChrAlju06 6365264 6366428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0712 117 204 B3 DNA Binding Superfamily AT2G46530 34.091 2.13e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju06g0712 AUX_IAA 9.2e-35 CL0072