Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0706 ATGAGGCGAAACCCAGAAAATTGTGAAGTTCGCTGTGCTTTGCCGCGATGTCCGCTAGTCTTTTCCGCGACTTCCGCTCGTCTTCGCCTTGATGTCCACTACCTTCATTCTCTTGGATCAGAGAGTGAGATCTTCTTAAAAGCTTCAAGATACCACCACCCACTCGCAATATTTGCAAATCCGGTGTTGTTGTTGGGGTTGAAATCCGCGCTAGTTTTCGGATCGATCTGTTCGATTATCTTCCACATGGAGGGAAAGCTTGACTCCGACGATGGCGTGAAGCCCGTGACGGAGCAAGGAGCCGGAGGAGAGAAGGGCCTTGACGTGGTTCCAGAATCTTCTCCTCTCGCTGTGAATTCTGGCAAAAATGTTGATGGTGATGCTTGCGATGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGGAAAGAAGCATCTCTCTGCAAACAGGTCAATGCCAGCATCTGGACCGAATGCCTCTCAGCTCACCATCTTCTTCAACGGGAATGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAGATAATACGTATTGCTGCTTCTGCTGTTAAGTCTTCTGACATGAAGAATGGAATACAATCCCCCTTTACTTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACTCCTAATAATGTGGCTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAACGTTTTCTTGAGAAGCGGCGAGATAGGTTGGGGAGCAGAGCCCCATATACTTCTCCAGCAAGAACTAAAGTGTCTGAGAATACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTTCAAACACTCACAGGAGGAGATTCAACCTGGTATCACTGCCTCTTAA 936 0.4776 MRRNPENCEVRCALPRCPLVFSATSARLRLDVHYLHSLGSESEIFLKASRYHHPLAIFANPVLLLGLKSALVFGSICSIIFHMEGKLDSDDGVKPVTEQGAGGEKGLDVVPESSPLAVNSGKNVDGDACDGEAVEESAGDLLGKKHLSANRSMPASGPNASQLTIFFNGNVCVYDGIPAEKVHEIIRIAASAVKSSDMKNGIQSPFTSPIPTRPSSPQGTPNNVASPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYTSPARTKVSENTENSCSADNAPDLVSFKHSQEEIQPGITAS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0706 311 MobiDBLite consensus disorder prediction 264 311 - -
Alju06g0706 311 ProSiteProfiles Tify domain profile. 156 191 IPR010399 -
Alju06g0706 311 SMART tify_2 156 191 IPR010399 -
Alju06g0706 311 Pfam Jas motif 246 270 IPR018467 -
Alju06g0706 311 MobiDBLite consensus disorder prediction 272 291 - -
Alju06g0706 311 Pfam tify domain 158 190 IPR010399 -
Alju06g0706 311 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 134 283 IPR040390 -
Alju06g0706 311 MobiDBLite consensus disorder prediction 197 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0706 Alju-ChrAlju06 6319915 6325258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0706 125 270 Tify Gene Family AT5G20900 47.059 4.26e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju06g0706 tify 2.9e-15 No_clan