Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0699 ATGGCTTCCTTGAGTATCAAACTCTTCCTCTTTCTCTTCCCAATCTTCCTCTCACAAACTTTCGCTTCTCCCACAACAACACTTCACCCAAATCTCACTTCCATAAGATCTTTCTGCAGAACCAGACCATACCCAGAAGCTTGCTTCAATTCTTTAAAGCTCGGCATTTCCATCAACATAAGCCCAAATATCCTCACCTACCTCCTTCAGTCTCTGCAAACCGCCATCTCCGAAGCCACCCACCTCTCCGATCTCTTCCACAATGCAGGCGGCGGCGGCGGTTCTTTAAACCTCGTCGAGAAGCAGAGAGGTTCAATTCAAGACTGCAGAGAGCTTCATCTCTCAACATTGTCTTCCCTCAAAAGATCACTCTCTGGTGTTTGTGATTCTCCCACTTCTTCCAGAAAGCTCGCCAATGCCAGAGCCTACCTCAGCGCCGCCATGACCAACAAGAACACTTGCTTGGAAGGTCTCGACTCTGCTACGGGCTCCCTCAAGCCTCTTCTCGTGGACTCCACCGTCGAAACTTACAAACACGTCAGCAACTCACTCTCCATGCTCCCCAAGCCAGGAGGCTCCAGAGGCCATAAGAACAGGCGTCGTCGTTTGCTGGGAGCTCCGGCGTGGCTGAAGAAGAGAAACCGTCGGATCTTGGACGGGGAAGAGTACGATCCCGATGATATGCTTGTGGCGGCGGCGGATGGAAGTGGGAACTTCAGCACCATTACTGAAGCAGTGAACTTTGCTCCCAATAATAGCTTGTACAGGACAGTGATCTATGTGAAAGCAGGGGTTTATGAGGAAAATGTGGAGATCCCAAGTTACAAGACCAACGTTGTTCTGCTCGGAGATGGAAGCGATGTCACCCTCATCACCGGTGACAGAAGCGTGGGCGGTGGCTGGACCACCTTCAGATCTGCAACTCTAGCCGTATCCGGTGATGGGTTTCTGGCACGAGACATAGCGATAGAGAACAGAGCAGGGCCGGAGAAGAACCAAGCAGTAGCGTTAAGAGTAAACGCGGACTTAACGGCGCTATACAGATGCGCCGTTTATGGCTACCAAGACACTCTCTACGTCCATTCCTTCCGTCAGTTCTACAGAGAATGCGACATCCACGGCACCGTAGACTTCATCTTCGGGAACGCCGCCGTCGTTTTCCAAGACTGCGACGTCGTTTCGAGGAAGCCAATGCCTCACCAGTTCACCGTCATTACAGCTCAGGCCCGTGACTCACCGGACGAGGACACCGGAATCTCGTTCCAGAATTGCTCCGTCATAGCCACCCAAGACCTCCATGATAGCTCTAGCAGCTTCAAGAGCTACCTCGGACGTCCATGGAGGCCATATTCTCGTACTGTGTACCTTGAGTCTTACATTGATGACTTCGTGGACCCAGAGGGGTGGAGGGAGTGGTCTGATTCGAATGAAGATGATTTGGAGACGTTGTACTGTGGAGAGTACCAGAATTATGGGCTGGGTTCGGGTACGGGCGGTAGGGTGAATTGGGCTGGGTACCATGTGATGGGGTATGAGGATGCATATAATTTTTCGGTTTCTCAGTTCATTATGGGTGATTCTTGGCTTCAGTCCACTTCATTCCCTTATGATGCTGGCATTTGA 1623 0.5139 MASLSIKLFLFLFPIFLSQTFASPTTTLHPNLTSIRSFCRTRPYPEACFNSLKLGISINISPNILTYLLQSLQTAISEATHLSDLFHNAGGGGGSLNLVEKQRGSIQDCRELHLSTLSSLKRSLSGVCDSPTSSRKLANARAYLSAAMTNKNTCLEGLDSATGSLKPLLVDSTVETYKHVSNSLSMLPKPGGSRGHKNRRRRLLGAPAWLKKRNRRILDGEEYDPDDMLVAAADGSGNFSTITEAVNFAPNNSLYRTVIYVKAGVYEENVEIPSYKTNVVLLGDGSDVTLITGDRSVGGGWTTFRSATLAVSGDGFLARDIAIENRAGPEKNQAVALRVNADLTALYRCAVYGYQDTLYVHSFRQFYRECDIHGTVDFIFGNAAVVFQDCDVVSRKPMPHQFTVITAQARDSPDEDTGISFQNCSVIATQDLHDSSSSFKSYLGRPWRPYSRTVYLESYIDDFVDPEGWREWSDSNEDDLETLYCGEYQNYGLGSGTGGRVNWAGYHVMGYEDAYNFSVSQFIMGDSWLQSTSFPYDAGI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0699 540 SUPERFAMILY Pectin lyase-like 228 538 IPR011050 -
Alju06g0699 540 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Alju06g0699 540 PANTHER PECTINESTERASE 16 530 - -
Alju06g0699 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 189 IPR035513 -
Alju06g0699 540 Pfam Plant invertase/pectin methylesterase inhibitor 34 186 IPR006501 GO:0004857
Alju06g0699 540 FunFam Pectinesterase 31 189 - -
Alju06g0699 540 Pfam Pectinesterase 230 526 IPR000070 GO:0030599|GO:0042545
Alju06g0699 540 CDD PMEI-like_3 37 192 - -
Alju06g0699 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 187 IPR035513 -
Alju06g0699 540 SMART PMEI_2 30 186 IPR006501 GO:0004857
Alju06g0699 540 ProSitePatterns Pectinesterase signature 2. 372 381 IPR033131 -
Alju06g0699 540 FunFam Pectinesterase 223 540 - -
Alju06g0699 540 Gene3D - 225 540 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0699 Alju-ChrAlju06 6194030 6201271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0699 27 540 Carbohydrate Esterase AT2G26440 66.031 0.0 697