Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0698 ATGGCATTTCAAGACTTCGATCTAATCACTGAGAAAAGAAAAAATGACAAGAAACAAAAACTCAAACGCAGAATCGCCATAGGCGCTGTTTGCACCATCGTCGTCATTGGTCTCATCGGAGCCGTCGCTTTCGTAATGGTCACCAAAAACAGTGAAGAAGACAAGGAATTCAATAACCACAACAAAAAATCCCCACCTTCCTCCTCCTCCTCCTCCTCAAAGAGTAACCCTGCCAACCAGGTTTCTGCTGTTTCTGAGAAACTTGTGAAGACCATTTGCGGTTACACCGATTACCAGGAAAAATGCGAGACAAGTCTGAAGGAGGAAGTGAAAAACGATGCAAAAATATCGCAACCCAAAGATGTCCTTAAAGTTGCTATCTCCGTCGCCCAGGATGAGGTCAATAAGGCCATGAACAAATCCAGCAACTTCAACTTTGAAACCGACCAAGACAAAGGTGCTTTCGAGGATTGCAAGAAGCTTCTAGAAGCCGCGAAGAACGATCTAGGGAATTCATCTTCACATGTTGCGTCACTCGACTTGACGAGGCTGACGTCATCCTCCTCGGATTTGAACAGTTGGCTCAGTGCTGTTATTTCTTTCCAAGGAGCTTGTCTTGATGGGTTTTCTGAAGGGAAATTGAAGACGGAATTGGAAAGTGCTTTTAAGGATTCAACGGAGTATGTTAGCAATTCTCTTGCAATTTTATCGCAGTTAGGCTCAGCTTTTCCATCGGCACTATTGAACGGCGGTGCTAGTCGTCACTTGCTGTCGTCGTCCGATGATAATGGTCTTCCAGAGTGGATGAAAGATGAAGATCGGAGGATGTTGAAGGCAGCTGATGATAAACCTACACCTAACGTCACCGTGGCTAGCGATGGCAGTGGCGACTTCAAAACTATCTCCGAAGCTCTAAAAGCCATACCACAAAAATACGATGGACGGTACGTGGTTTATGTTAAAGCAGGAACATATGATGAGACTGTAGTCATAGAATCGAGAATGGTAAACCTAACCCTTTATGGCGATGGATCACAAAAGAGCATTATCACTGGCAACAAGAATTTCGTTGATGGAGTAAGGACTTACCATACCGCATCATTTGCTGTAGAAGCAGATGGCGCTCGGGAGGAATTTGAATCTTGGCCTGAAATGGAGCAGCAAAGGCACCAAAAGGAGGTCCGACGGGAGGAAGAAGCTGAAGAGTTACAACATGGCCCTTTAACCATTGAGGAGCTTCAGTCATCAGGCATATCTGCTACCGATGTTAAGAAACTTAAAGATGCCGGTCTTTGGACGGTTGAATCTGTGGCTTTCTCTCCTAGAAAGGACCTTCTGCAGATTAAAGGAATCAGTGACGCTAAAGTCGATAAAATCATTGAAGCAGCTTCTAAATTGGTGCCGTTGGGTTTCACTAGTGCCGCCCAACTTCATTCCCAGAGGCTTGCAATTATTCAATTAACATCAGGATCAGAAGAGCTAGACAAGATATTGGAAGGAGGGGTAGAGACAGGATCTATAACTGAGCTATATGGTGAATTTCGATCAGGGAAGACTCAGTTGTGTCATACTCTGTGTGTCACTTGCCAATTGCCACTTGATCAAGGAGGTGCTGAGGGCAAAGCAATGTACATTGATGCAGAGGGTACATTTAGACCACAGCGACTCTTGCAAATAGCAGACAGGTTTGGACTAAATGGAGCTGATGTGTTGGAAAATGTTGCCTATGCTAGAGCATATAACACTGATCATCAATCACGGCTTCTGCTCGAAGCAGCTTCAATGATGGTGGAAACAAGGTTTGCTCTTGTAATAGTTGACAGTGCTACTGCGCTCTATAGGACAGATTTTAGCGGAAGGGGGGAGCTTTCTGCCCGGCAAATGCATCTGGCTAAGTTCCTTCGGAGCCTTCAGAAGTTAGCAGATGAGTTTGGTGTGGCTGTTGTGATAACAAACCAAGTAGTTTCACAAGTTGATGGTTCTTCAGTCTTTGCTGGACCTCAAATCAAGCCTATTGGTGGCAACATTATGGCTCATGCAACAACGACAAGGCTACATCTTCGGAAGGGTAGAGGGGAAGAACGCATCTGTAAAGTGATAAGTTCTCCTTGTTTGGCTGAGGCTGAAGCAAGGTTTCAGATTTCTCCAGAAGGTGTTACTGATGTTAAAGACTGA 2175 0.4487 MAFQDFDLITEKRKNDKKQKLKRRIAIGAVCTIVVIGLIGAVAFVMVTKNSEEDKEFNNHNKKSPPSSSSSSSKSNPANQVSAVSEKLVKTICGYTDYQEKCETSLKEEVKNDAKISQPKDVLKVAISVAQDEVNKAMNKSSNFNFETDQDKGAFEDCKKLLEAAKNDLGNSSSHVASLDLTRLTSSSSDLNSWLSAVISFQGACLDGFSEGKLKTELESAFKDSTEYVSNSLAILSQLGSAFPSALLNGGASRHLLSSSDDNGLPEWMKDEDRRMLKAADDKPTPNVTVASDGSGDFKTISEALKAIPQKYDGRYVVYVKAGTYDETVVIESRMVNLTLYGDGSQKSIITGNKNFVDGVRTYHTASFAVEADGAREEFESWPEMEQQRHQKEVRREEEAEELQHGPLTIEELQSSGISATDVKKLKDAGLWTVESVAFSPRKDLLQIKGISDAKVDKIIEAASKLVPLGFTSAAQLHSQRLAIIQLTSGSEELDKILEGGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGAEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALVIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVSQVDGSSVFAGPQIKPIGGNIMAHATTTRLHLRKGRGEERICKVISSPCLAEAEARFQISPEGVTDVKD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0698 724 CDD PMEI-like_3 91 241 - -
Alju06g0698 724 SMART AAA_5 504 691 IPR003593 GO:0016887
Alju06g0698 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 723 IPR027417 -
Alju06g0698 724 CDD Rad51 487 721 - -
Alju06g0698 724 Pfam Helix-hairpin-helix domain 416 464 - -
Alju06g0698 724 Gene3D - 483 724 IPR027417 -
Alju06g0698 724 Pfam Pectinesterase 287 374 IPR000070 GO:0030599|GO:0042545
Alju06g0698 724 SUPERFAMILY Rad51 N-terminal domain-like 402 469 IPR010995 GO:0000166
Alju06g0698 724 ProSiteProfiles RecA family profile 1. 483 654 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Alju06g0698 724 MobiDBLite consensus disorder prediction 53 82 - -
Alju06g0698 724 ProSiteProfiles RecA family profile 2. 661 724 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Alju06g0698 724 SUPERFAMILY Pectin lyase-like 285 375 IPR011050 -
Alju06g0698 724 FunFam DNA repair protein RAD51 homolog 406 478 - -
Alju06g0698 724 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 87 239 IPR035513 -
Alju06g0698 724 NCBIfam pectinesterase inhibitor domain 70 239 IPR006501 GO:0004857
Alju06g0698 724 FunFam DNA repair protein Rad51 homolog 482 724 - -
Alju06g0698 724 Pfam Rad51 469 722 IPR013632 -
Alju06g0698 724 Gene3D - 285 378 IPR012334 -
Alju06g0698 724 SMART PMEI_2 84 235 IPR006501 GO:0004857
Alju06g0698 724 Gene3D - 406 478 - -
Alju06g0698 724 FunFam Pectinesterase 85 240 - -
Alju06g0698 724 PANTHER RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER 388 723 - -
Alju06g0698 724 Pfam Plant invertase/pectin methylesterase inhibitor 88 235 IPR006501 GO:0004857
Alju06g0698 724 NCBIfam DNA repair protein RAD51 410 724 IPR011941 GO:0000150|GO:0000724|GO:0003690|GO:0003697|GO:0008094|GO:1990426
Alju06g0698 724 Gene3D Invertase/pectin methylesterase inhibitor family protein 84 241 IPR035513 -
Alju06g0698 724 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0698 Alju-ChrAlju06 6184265 6191211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0698 1 374 Carbohydrate Esterase AT2G26450 38.481 7.75e-82 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0698 06 6184265 6191211 Alju06g0698 06 6184265 6191211 ECH