Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0673 ATGAAGGCTTTACCGAATGGCTACTTGCCTAATTCTGGCGAAGGAGAAAGAAAAACAATCAACTCAGAGTTATGGCATGCATGTGCTGGACCCCTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTTGTTTATTTTCCTCAAGGACACAGTGAGCAAGTTGCGGCATCCATGCAAAAGGAGGCTGATTTCATACCCAGTTATCCTAACCTTCCATCCAAGTTAATTTGCATGCTTCACAATGTTGCACTACATGCTGATCCGGAAACAGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGACATGGGTCTGAGGCAAAGCCGACAGCCTGCTGAATTCTTCTGCAAAACTCTCACAGCTAGTGATACAAGCACTCATGGTGGATTTTCTGTACCTCGAAGAGCAGCAGAGAAAATATTTCCACCTCTGGATTTTTCAATGCAACCTCCTGCTCAGGAGATTGTTGCCAAGGATTTGCATGACACTACATGGACATTCAGACATATTTACCGCGGGCAGCCAAAGAGACATCTGCTGACTACAGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTCATTAGAGATGGAAAACAGCAGCTTCTCGTGGGTACAAGGCGTGCTAATAGACAGCAGCCTGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTTGCTGCTGCAGCTCATGCCGCTGCAAATAACAGTCCATTTACCATATTTTACAATCCAAGAGCTAGCCCTGCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCCATGTATACCCAAGTTTCCCTTGGAATGAGGTTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGTCGATACATGGGTACGATTACAGGGATCAGTGACTTGGATCCAGTGCGGTGGAAAAATTCACAGTGGCGCAATCTTCAGGTCGGATGGGATGAATCAACAGCTGGTGAGCGCCCTAGCAGAGTATCAATTTGGGACATTGAACCGGTGGTTACTCCTTTCTACATTTGCCCACCTCCTTTCTTCAGGCCTAGGTTCCCCAAGCAACCAGGAATGCCAGATGATGAGTTTGACATGGAAAATGCATTCAAGAGAGCTATGCCCTGGCTTGGAGATGACTTTGGCATGAAAGATGCCTCCAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAGTGGATGAGCATGCAGCAGAATAACCAGTTATCTGCTGCACAATCAGGAATGTTCCCATCTGTGCTTTCGTCCAATTCCCTTCATAATAACCTCGGCGCTGATGATCCATCCAAATTATTGAGTTTTCAAAACCCTGTCCTCTCTGCATCAAATCTTCAATTTAACAGGCCAAATTTACCGAACCAAGTCAACCAATTGCAACAAGCCCCAACATCATGGCCTCAGCAGCAGCAACAGCCGCAGCAGCAGCAGATGCAGTCCTTGTTGCAAGCACCTGTAAACCAGCTCCAGCTGCAGAGGCAGCAGCCACAGCCGCCGCTGCAGCAGCTTCCTGAGCCACAAAATCTGACACAGCAGCAGCAGCCCCAATTGCAGCAACAGCGAGTACAACAACCGCAGCAGCAGCAGCCATGCCAACAGGCCATTATAAACAATGGGGTGATTGGGTCTAGCCAGATTCCAAATCAGAATGTGCAACAATCAATAGCCTACTCTCAGCTTCAGCAGCAGCAGTTACTCTCAGCTAGCATGCCACTTCAGCAAAATACTCAATCAGCCAGCAAGAATACATTCCCTCTCTCAAACTTACCACAAGATTCACAGTTTCAGCCACAGATAGACCAGCAATCCACTCTCTTGCAGAGGCAGCAGCAGCAGCAAAATCAATTGCAGATATTACAACAAAACTTGTCACAGAGGGCCCCTCAACAACCACAAGTGGCTCAATTGCCTCAACAAAACCTGTCAGAACAACAGTTGCAGTTGCTGCAAAAATTGCAGCAGCAGCAGCAGCAGCAATTTCTTTCTCCAGCTAGTTCACTTTTGCAGCCTCAGCTGCTACAGCAACAGCAAGCACACCTACAAAACCAACAACTATCACAACCGCCTCTATCTCAGCATCAGCCTCAGCAGCTCAGCAACAATGCAATATCTGCTGAGAAGCTTCTGGGCAGCAACAGCTTTTCTTCTTCACCTCTGATACAACCACAACAGCTTCCTTTGAACCCAGCCCAGAATACACCGAAACCACTTACAACTACCAGAGTTCCTTCCAATCTTACAGATGGAGATGCCCCATCATGTTCAACCTCGCCATCAACTAATAACTGCCAGGTATCTCCACCAAACCTCCTGAAGAGAAATCAACAAGTGCCAGCAACATTAGGGGGGAGCTTAGTAGTTGAGCCCACTAATAATCTGGTACAGGAGCTTCAGGGCAAGTCTGATATCCAGATTAAACATGAGTTGCCAGGTGTAAAAGGGCCTGACCAGCTAAAGTATAAAGGGACGATAACTGATCAATTGGAAGCCTCCTCTTCTGGAACATCTTACTGCCTTGATCCTTGCAGTGTGCAGCCCAACTTCCCCCCTCCCAATTTCTGCATGGATGGGGATGTCCAATCACATCCTAGGAATAGTCTTCCATTTGCCTCTAATCTTGATGGGTTGACGCCTGATACTTTACTCTCGAGAGGGTATGACTCACAAAAAGATTTTCAAAATCTGCTCTCTAACTATGGTGGTGCTCCAAGAGATATAGAAACTGAGCTGTCAACTGCTGCTATCAGCTCACAGTCATTTGGTGTGCCAAGCATGCCCTTTAAGCCTGGCTGCTCAAGTGATGTTGCCATCAATGAAACTGGGGTTTTGAATAATAGCTTGTGGGCTAACCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAACGTGGCTCTGTTGGAAGGTGCATTGATGTCACTCGTTACAAGGGATATGATGAACTCAGACATGACTTGGCTCGTATGTTTGGGATTGAGGGGCAACTGGAAGATCCTCAAAGGACTGACTGGAAACTAGTATATGTAGATAATGAAAATGACATTCTTCTTGTTGGGGACGACCCTTGGGAAGAATTTGTAAGCTGTGTTCAGAGCATAAAGATACTGTCATCTGCTGAAGTGCAGCAGATGAGCTTAGACGGGGATTTGGGTAATGTTCCAATATCCAATCAAGCTTGTAGTGGGACAGATAGTGGTAACGCATGGAGGGGACAATACGACGATAACTCGGCCGCCTCATTTAACCGATAA 3327 0.4608 MKALPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLRQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKQQLLVGTRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPRFPKQPGMPDDEFDMENAFKRAMPWLGDDFGMKDASSSMFPGLSLVQWMSMQQNNQLSAAQSGMFPSVLSSNSLHNNLGADDPSKLLSFQNPVLSASNLQFNRPNLPNQVNQLQQAPTSWPQQQQQPQQQQMQSLLQAPVNQLQLQRQQPQPPLQQLPEPQNLTQQQQPQLQQQRVQQPQQQQPCQQAIINNGVIGSSQIPNQNVQQSIAYSQLQQQQLLSASMPLQQNTQSASKNTFPLSNLPQDSQFQPQIDQQSTLLQRQQQQQNQLQILQQNLSQRAPQQPQVAQLPQQNLSEQQLQLLQKLQQQQQQQFLSPASSLLQPQLLQQQQAHLQNQQLSQPPLSQHQPQQLSNNAISAEKLLGSNSFSSSPLIQPQQLPLNPAQNTPKPLTTTRVPSNLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQVPATLGGSLVVEPTNNLVQELQGKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYCLDPCSVQPNFPPPNFCMDGDVQSHPRNSLPFASNLDGLTPDTLLSRGYDSQKDFQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSSDVAINETGVLNNSLWANQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0673 1108 Gene3D - 976 1070 - -
Alju06g0673 1108 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Alju06g0673 1108 MobiDBLite consensus disorder prediction 597 619 - -
Alju06g0673 1108 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Alju06g0673 1108 FunFam Auxin response factor 289 361 - -
Alju06g0673 1108 FunFam Auxin response factor 976 1070 - -
Alju06g0673 1108 SUPERFAMILY CAD & PB1 domains 994 1059 - -
Alju06g0673 1108 FunFam Auxin response factor 124 228 - -
Alju06g0673 1108 Gene3D - 124 227 IPR015300 -
Alju06g0673 1108 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Alju06g0673 1108 Gene3D - 289 360 - -
Alju06g0673 1108 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 1070 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju06g0673 1108 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju06g0673 1108 CDD B3_DNA 125 217 IPR003340 GO:0003677
Alju06g0673 1108 ProSiteProfiles PB1 domain profile. 981 1074 IPR000270 GO:0005515
Alju06g0673 1108 MobiDBLite consensus disorder prediction 482 550 - -
Alju06g0673 1108 Pfam AUX/IAA family 976 1067 IPR033389 -
Alju06g0673 1108 SMART B3_2 126 228 IPR003340 GO:0003677
Alju06g0673 1108 MobiDBLite consensus disorder prediction 738 793 - -
Alju06g0673 1108 Coils Coil 631 651 - -
Alju06g0673 1108 Coils Coil 663 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0673 Alju-ChrAlju06 5900302 5907587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0673 1 487 B3 DNA Binding Superfamily AT1G19220 83.573 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Alju06g0673 AUX_IAA 9.2e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0673 06 5900302 5907587 Alju06g0673 06 5900302 5907587 ECH