Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0670 ATGGTGAAGCCGGTCTTCGATGAGCCCTCAGAACGAAGAGATTCTAAGTTCAGAGGGGTTCGTAAGAGGAAGTGGGGCAAGTGGGTTTCCGAAATTAGGCTACCCAATAGCAGGGAGAGGATCTGGTTGGGATCTTATGACTCCGCCGAGAAGGCGGCGCGTGCCTTCGACGCCGCCATGTTTTGCTTACGTGGCCACTCCGGTAACTTTAATTTCCCCGATAACCCGCCTGACATCCACGGCGGGAGGTCTATGTCCCCGGCTCAGATTCAAGCCGCCGCGGCCCGTTTCGCCAATTCGGATCCTGGGACGGGTCAAACAGATAATCCCATGACCCGAGAATTGGCAGAGGAGTCTCCGTCTCGTTCGCTCTCGGAAGCGACGATTATGCCCGTGGAATCTCCGTCACCCTCGCTTTCCGAGGTGACGGTGCAAACGGACAGTGAAATGACACTAAACGGATCGGTCCCGGATCTTTTTAAGACAGTCGGATCGGGTAATTACGCGAATGAATACGGGATATTCGCGGGGTTTGATGATCTAACCAGTGGGTTTTACATACCAGAGATGCCAAGTGTGAATTACGAGGAAGAAAACGTGGAAGGCCTTATAATTGATGACTCATTCCTGTGGAATTTTTAA 642 0.5234 MVKPVFDEPSERRDSKFRGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAMFCLRGHSGNFNFPDNPPDIHGGRSMSPAQIQAAAARFANSDPGTGQTDNPMTRELAEESPSRSLSEATIMPVESPSPSLSEVTVQTDSEMTLNGSVPDLFKTVGSGNYANEYGIFAGFDDLTSGFYIPEMPSVNYEEENVEGLIIDDSFLWNF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0670 213 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Alju06g0670 213 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 MobiDBLite consensus disorder prediction 99 126 - -
Alju06g0670 213 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 MobiDBLite consensus disorder prediction 1 21 - -
Alju06g0670 213 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Alju06g0670 213 MobiDBLite consensus disorder prediction 1 16 - -
Alju06g0670 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 140 - -
Alju06g0670 213 MobiDBLite consensus disorder prediction 100 126 - -
Alju06g0670 213 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Alju06g0670 213 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0670 Alju-ChrAlju06 5886064 5886705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0670 15 213 AP2-EREBP Transcription Factor Family AT1G19210 49.020 1.24e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g0670 AP2 2.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0670 06 5886064 5886705 Alju06g0670 06 5886064 5886705 ECH