Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0645 ATGGAAGGTTTCTTTCCCGACAAATTTCTTGACGATGCTTTCTTGGATGAATCGATTGGAAACCAGAATGATCTTCTTCGGTTTACAGAGGTTGAGACTAGACAAAAAAGCTTTCTTGTCGGATCGAGTTCCATTGTTGAAGACCAACCTCCTCCTCCTCCTGCTGAACAGAGTGATTTTCTTCAGTATGGTGATTTTCTCAGATCTGGGCTGGGGCAAGAAAGTTCTCAGAATGTGTTGAATTCAAATGAAGGTGCTTTTGTTCAATACAGTGAGGAACCAGAAATAGGATTGGGGCAAGAGAATTCATGTTGCATTAACACGAAAGATCTTGGCCATGGAGCTTCCCCTGCTGAAAATCCAAGTGCTTTTGTTCAATACAGAGAGCTACCCAGAACAGGGCACGGTCAAGAAAGTTCAGATGCTATGAACATGAGAAAGAAAATGATTGGTTACTTGACAAGAACTTGTCCTGCAGAGAGAAGCAACACGGCAGAGTATGAAAGAGAACGAGGTTTCAGGCATATGATTAACGAGAGGATGAGAAGGCAGAGACAGAGGCAGTGTTGCTTGGCCCTGCATTCTATACTACCATTTGGAACAAAGAGCGACGTTAATTCAGTGGTTCAAATGGCAGCTAAGGAGATTCAAAAGCTGGAAGCTTGCAGGGAAGAATTGAAGAGGCAAAATGCAGGGCTTGAAGAAAAAATTAAAGGTGAACAAGGAAACAGAGTTGAGTTGAAGATGGCTCATGCTACATCTCCAATAGATTCAATGCTTGAGACTCTACAATTATTGATGGAGCTTGGAATGAATACCAGAAGCATCACATCAAATTTCTCACATCAAGAATTGTTTGCCTCGTTAGAGATTCATGCAAATGATTATATTTCATCACATGGGAATTCTATTGAAAAGTATGTGGATTTGTTTGAGTGA 939 0.4111 MEGFFPDKFLDDAFLDESIGNQNDLLRFTEVETRQKSFLVGSSSIVEDQPPPPPAEQSDFLQYGDFLRSGLGQESSQNVLNSNEGAFVQYSEEPEIGLGQENSCCINTKDLGHGASPAENPSAFVQYRELPRTGHGQESSDAMNMRKKMIGYLTRTCPAERSNTAEYERERGFRHMINERMRRQRQRQCCLALHSILPFGTKSDVNSVVQMAAKEIQKLEACREELKRQNAGLEEKIKGEQGNRVELKMAHATSPIDSMLETLQLLMELGMNTRSITSNFSHQELFASLEIHANDYISSHGNSIEKYVDLFE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0645 312 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 37 291 IPR044658 -
Alju06g0645 312 Pfam Helix-loop-helix DNA-binding domain 174 220 IPR011598 GO:0046983
Alju06g0645 312 Coils Coil 209 243 - -
Alju06g0645 312 CDD bHLH_AtbHLH_like 168 226 IPR045239 -
Alju06g0645 312 Gene3D - 168 248 IPR036638 GO:0046983
Alju06g0645 312 SMART finulus 176 225 IPR011598 GO:0046983
Alju06g0645 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Alju06g0645 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 234 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0645 139 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 40.000 4.44e-32 117